Pseudomonas plecoglossicida NB2011, L321_21542

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold83, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCAGCGCTGCTGGGCGCAGCCTGCCTGACAGCGCTTGCTGACACCAACGACACTGCTGACGGCACATCTGGATTTATCCAGGCAGTCGAGAGAAATGG TTCACGCTCGATGCATCCCAATGCGCCTTTGGCAGTCGGACGATTCGTTGACGATGATGCATCTGGCTACCTGCAGACGGTCGGGAGAAATGGGTCAAAC TCCATGCACCCCAATGCGCCTGTACCGACCGAGCAATTCGCTGACGATGATGGGCAGGCGTTACCACAGACCGGAGAACATTAGCGCGCTGTAATCAAGG ATCAACCGCAAGCATCGCATGAATGCCCGAAGCCCGCAGCCAGCAAACGGCCGTGGCTGGAAGTGACAGCCCTCCAGCACGGCACCCACAAACCGGCCTT CGCGGGCTTAGGGCAGCAACCCCATCTTCCGTTAGCTACGCTTCCTGCAACAAAGCGGCTCCGCTTCGGCCTCTCTTGATAGATGGAAGAGCTGAGATCA
DNA Sequence for Gene
>L321_21542
ATGGACAGCGTGCCCAGCCCCCCGGTTCTACCGACCATCCTGGTGGTCGACGACTCCCCTGACAACCTCATGCTGATGGTTGATCTGCTCAAGGACCGTT ATCGGGTCAAGATCGCCAACAGCGGCGAGAAGGCCTTGCGCATCCTCGAAGGCGACCCGCTGCCCGACCTGGTGCTGCTGGACGTCATGATGCCGGGCCT GTCTGGCTACGCCGTGGCCGAGGCGCTCAAGCAGGACGCCCGCACCCGGGACCTGCCGATCATCTTCCTCACGGCCATGGCAGCGGCCGAAGACCAGGTC CGCGGCCTGGAGCTGGGCGCAGCCGACTACATCACCAAGCCGATCAGCCCGCCGATCGTCCTGACCCGGGTCCAGGCCCAGCTCAAGGTCAAGGCCGCAG CGGACTTCCTGCGCGACCAGAACGACTACCTCGAGCAGGAAGTGCAGCGGCGCACATGCGAAATCATGGCGATCCAGGATGTCACCATCCAGGCCATGGC ATCGCTGGCCGAAACGCGAGACAACGAAACCGGCAACCATATCCGGCGCACCCAGAACTACGTCAAGCTCCTGGCCGAACTGTTGTCCCAGCATCCTCGC TTTCGTCATTTCCTCAACGAGGCGACCATCAACCTGTTGTTCAAGTCAGCCCCTTTGCACGATATCGGCAAGATCGGGATTCCCGATCACATCCTGCTCA AGCCCGGACGCTTCACACCCGAAGAGTTCGAAATCATGAAGACCCACACCACCCTCGGCCGCGATGCCATCCAGCGTGCCGAGGATCAACTGGGAATGCG GGTCGAGTTCCTTCACCTGGCCAAGGAGATCGCCTACAGCCACCAGGAAAAATGGGACGGCAGCGGTTACCCGCAGGGGCTTGCCGGGGACGACATACCG ATCAGCGCCCGGCTGATGGCCGTGGCGGACGTGTATGACGCGCTCATCAGTCGCCGTGTCTACAAACCGCAGATGCCCCATGACAAAGCGGTGGCGCTGA TCCGCGACGGCCGCGGCTCGCACTTCGACCCCGACATTTGCGATGCCTTCCTGAACAACGCCGAGCGTTTCCGGGAAATTGCCGAACGTTTCGCCGACAC CGAGCAAGAAATCGAACAACTGGCCGTTTCGGGGCAACCTGTCGGAAAACCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGGCAAAGGCCGATAGGTGAACGTCAAGGAGTGCTTGTCTATGAATCCACTCGCTCTGCTCGAGCGCCTGCCACTGCGCCGCAAGCTGATTCTCGGCCC TGCTGTCCTGCTGGTGCTGTTTCTCGTGCTCGGCGTATTGAGCCTGCGCATCCAGTCGGAGCTCAAGCGCGAACTGCAGCAGCTCTACCGCGAGGACCTG GTCGGTGCCAATCACCTGCATGACGTGCGAGTCCAGCTGCCGCACATCATCGAGGCGCTGCAGCAGGCAGTCGCCGCGCGCAGTGCGGACAAGCGCATTG GCGCCTTGCGGCAGCTGGAAACCGACAAGCAGAAACTGCAGGAATCCCTGGCGCTCGCCAGGCCAACGGTCTTTCGCGCCGTGAACCTTGAGCGGCTTGC CGAGTTCGAGTCGCTGTTCGAGCGCATTCTCGATACCAGCGACCAGGCGCTGGAACTGGCCGAAAACGGACGCCAGAGCGAGGCGGTGCAACGTTTGGAC
Amino Acid Sequence
>regulatory components of sensory transduction system
MDSVPSPPVLPTILVVDDSPDNLMLMVDLLKDRYRVKIANSGEKALRILEGDPLPDLVLLDVMMPGLSGYAVAEALKQDARTRDLPIIFLTAMAAAEDQV RGLELGAADYITKPISPPIVLTRVQAQLKVKAAADFLRDQNDYLEQEVQRRTCEIMAIQDVTIQAMASLAETRDNETGNHIRRTQNYVKLLAELLSQHPR FRHFLNEATINLLFKSAPLHDIGKIGIPDHILLKPGRFTPEEFEIMKTHTTLGRDAIQRAEDQLGMRVEFLHLAKEIAYSHQEKWDGSGYPQGLAGDDIP ISARLMAVADVYDALISRRVYKPQMPHDKAVALIRDGRGSHFDPDICDAFLNNAERFREIAERFADTEQEIEQLAVSGQPVGKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site