Pseudomonas plecoglossicida NB2011, L321_20392

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold82, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGTTGTGCCCGCGCAGCTCGATCGCGGCTTCTGGCTGGCTCCCACGCTGCTCTGCAACGTCACCGCAGACATGCGGGTTGCCAGGGAGGAAGTCTTCG GGCCGGTGATCACCGTCGAACGCTTCAGCGGCGAAGCCCAGGCCCTGCAACTGGCCAACGACACGCCCTTCGGCCTAGCGGCCGGTGTGTGGACCCGGGA TGTTGGCAAAGCGCATCGCTTGGCCCGTCGCCTGCGGGTCGGCACCGTGTGGATCAACGACTACAACGCCGCGTTCCCCCAGGCGCCCTGGGGTGGCTAC AAGTCCAGCGGCATAGGCCGCGAACTGTCGCGAGCCGGACTCGATGAGTTCACCGAGCTCAAGCACATCTACTTCAATACCGAACCAGCGGCGCTGAACT GGTTTGGTGTCGACCCGCGATGAACCTTTCCTGCTGCACCTAAAACAACAAGATCCACCAAAAGCAACCACTGCCTACGCTTGCCTTGAGGAGTTGAACC
DNA Sequence for Gene
>L321_20392
ATGAAAGCCTTGCTCTTGCTTGCATCCCTCAGTATCCCGTTGCTCACCCATGCCGCAGAACCTGCATCCTGCGCCACCGTGCGCTTCTCCGATGTCGGCT GGACCGACATCACCGTGACCACCGCCGTGGCCAGCGAAGTGCTGGAGTCGCTAGGCTACAAGACCAAGACCACCCTGCTGTCGATCCCGGTGACCTACCG CGCCCTGTCGTCCGGCAAGGAACTGGACGTGTTCCTCGGCAACTGGATGCCCACCACCGAAAACGACATCAAGCCCTACCGCGACGCAGGCACCGTGGAG ACCGTGCGCGCCAACCTGCATGGCGCCAAATACACCCTGGCGGTGCCCGACTACGTGTACGACGCCGGGCTGCATGATTTTGCCGATATCGCAAGGTTCA AGGACAAGCTCAACGGCCAGCTCTACGGAATCGAACCCGGCAACGACGGCAACCGGCTGATCCAGACGATGATCGACAAGAACGCCTTTGGCCTGAAGGA TTTCAAGATCGTCGAATCCAGCGAAGCGGCGATGCTCTCGCAACTCAAACGCGCCACGCGCAAGAATGGATGGATGGTGTTCCTGGCCTGGGAGCCGCAT CCGATGAACACCCGCAACAAGATGAAGTACCTCAGTGGCGGTGACGATTATTTCGGCCCGAACTACGGCCAGGCCACGGTCTACACCAACGTGCGCAAAG GCTACCTCAGCGAATGCAGCAACGTCGGCAAGCTACTGCAGAACATCGAGTTCAGCCTGGCCATGGAGAACCAGCTGATGGACGCGGTGCTGAACCAGAA CCAGAAACCGCGGGCAGCGGCCAAGGCATGGCTGAAGGCCAACCCGGCGGTGCTCGAGGCGTGGCTCGAAGGGGTCAGCAGCCGCGATGGCAAGGATGGC TTGGCAATGGCCAATGCGTGGTTGGCGAAGCAGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGGCGGCCACACGGCCTGGCTGCTCTGCGCAAACGGCGCTGAGCAGCCAGGCCCGGTCAATCGCTGTCGTCCTGGTTCACCTCTTTCCAGCTGTCGTCC GGGTCGAAGCGTTTCATGGCCTTGGCCAGCTTGTCGCCCTGCGGGCCCAGGTCCTTCTCGAACACCTGGCCGTCATGGCTGATCATGAAGCTCATCACCC CGGTATCGTTGTACTTGGCCGGCCAGGCGACCAGGGCGAAACCCCGGCTCATCTGGTTGCCGATCAGGTAGCTGTAGGCACCGCCCGGGGCCGAGGGGCC TTGGCCATCGAGGATTCGGAAGTGGTAGCCGTACCAGTCGTCACCCACCACATCCTGACCGAACAGCGGGCCCAACGGGCTGATCTGGCCATCGTCTTCG TCTTCCCAGAACAGGCCGTCGTGCTTGCCGGGAGTGCTGAAGATCTGCTGCGCATACTCCAGCGCACCATTGCCGTTACGGTCCTGGGAGGCGTAGTCCA
Amino Acid Sequence
>substrate-binding region of ABC-type glycine betaine transport system
MKALLLLASLSIPLLTHAAEPASCATVRFSDVGWTDITVTTAVASEVLESLGYKTKTTLLSIPVTYRALSSGKELDVFLGNWMPTTENDIKPYRDAGTVE TVRANLHGAKYTLAVPDYVYDAGLHDFADIARFKDKLNGQLYGIEPGNDGNRLIQTMIDKNAFGLKDFKIVESSEAAMLSQLKRATRKNGWMVFLAWEPH PMNTRNKMKYLSGGDDYFGPNYGQATVYTNVRKGYLSECSNVGKLLQNIEFSLAMENQLMDAVLNQNQKPRAAAKAWLKANPAVLEAWLEGVSSRDGKDG LAMANAWLAKQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site