Pseudomonas plecoglossicida NB2011, L321_20207

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold82, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCCAGCACTTCGCCGACCGCCTGGGGCGCCAGCGTTGGCTGATCGTGACGCCGCGCGACGGCATTCGTTTCGATGGCGAGGCCTTCGACTACCGACGT CATTGCCCGGAAGACTGGCGGCAATGGGCACGCAATGCCGATGATCCGGGGGCTGAGCTGTGGCGTACCTACTACCGCCATACCTTCAACCCGGCCCGGC TCAACCCGGATGCCCTGCGCCTGCATATGCCCGGGCGTTTCTGGCGGCATCTGCCAGAGGGCATGCTGATTCCGCAGCTCGAAGGGCTGGCGCGACAAGG CAAGCAACGTGACGGGCAAGCACTGGAAATCGGCGCGCAGCGAGGAAAAAAATCCTACGTATGGAGTAACTCTTCCTACAGGCAAATGTGAAAAATTCGT AGTTTTGTTGGCATACCACCTTACATGCCGTAACAAATCCTGACACACTTATTGCTAATCGTTCTCATAAGCATCTTCAATAAGATCAGGAAGCCCCACC
DNA Sequence for Gene
>L321_20207
ATGCCGTCGTACCTTGCGCCCACGCGCTCACTCCCCGCCCGCAATCTGCTCGCCATGGCCGTGTGCATGGCCATCGTCACCCCCGCTGTTGCCGAAGACG AAAAGCCCACGACGCTGGAGCTGGGTGCGACCGAGATCAGCTCCAACAGCCTTGGCAGCACCACCGAAGGCTCGACGTCCTACACCACCGGCTCCATGTC CACTGCCACCAAGCTGCCGTTGAGCCTGCGTGAAACCCCACAGGCGGTCACGGTGATCACCCGCCAGCGCATGGACGACCAGGCCATGACCAGCATCAAC GATGTGGTCGCCGCCACCCCCGGGCTGTTCCTCGACTACTCCAGCGGCCCGGGCCGGCAGACCTACTCGGCACGCGGCTTCGACATCGACAACCTGATGT ACGACGGTATCCCCAGCGGGTACCAGGGATGGACCGTCGGCGCCCAACCGAACCTGGCGATGTTCGACCGGGTCGAGATCGTGCGTGGTGCCACTGGCCT GGTCACCGGCTCCGGCAACCCGTCGGCGGCGATCAACCTGGTGCGCAAACGCCCGCTGGCGGAGCAGAAGGTCACTCTCACCGGTGCCGCCGGCAGCTGG GACGACTACCGCGGCGAACTCGACGCCTCCAGCCCGCTCAATGACAGCGGCACCCTGCGTGGTCGCGTGGTGGCCTCGTACCGCGACACCAACAGCTTCA TCGATGACGTGGAGGAAGACCACGGCCTGTTCTACGCCGTGACCGAGGCCGACCTCAGCGACGACACCACCCTGACCCTCGGCTTCTCCCACCAGAAGGA CAAGACCAACTACTTCTGGGGTGCCATGCCCACGGCGCTCGACGGTCATCACATGGACTTCTCGCGCTCCTACAACCCCGGCACCGACTGGGAGAACAAG GACCAGGAGATCGACACCCTGTTCGCCGAGGTGAGCCACCTGCTGGCCAATGACTGGAAGCTGCAGGTGAACGCCAACTACTCCCAGCAAGATGGCGTGT TCACCGGCTCCTACCAGTCGCGCTGGGCGGGCCTGCAAGCCCCCCTGTCGCGCACCGTCTACCAGTCCAAGCACCAGGAAAACCAGGCCGGCGTGGACGG CTTCCTCAGCGGCCCGTTCCAGGCTTTCGGCCGCACGCACGAGCTGGTGGTGGGCGCCAGCAAACGCATCTACGACATGGACACCTGGAACTACAGCCCG TACGACACCAACTATCCACTCAACGGTGGCAAGCCTGACTTCATGCATACCGGCAACAGCCGCGCGGTCACCACCCAGGAAGGTGTGTACGTGACCACCC GCCTGAGCCTGGCCGACCCGCTCAAGCTGATCCTCGGCGGGCGCCTGGACTGGTACGACTACGACGACAAGGAAAGCTCAAGCGCCGACTACAAGGTCAC CCGCAACGTCACCCGCTATGCCGGCCTGATCTACGACCTGGACGATCACCACTCGGTGTATGTCAGCTACAGCGACATCTTCAACCCGCAGAGCTACAAG GATGCCTCGGGTAGCCCGGTCAAGCCGATCGAAGGCAAGAACTACGAGATCGGGGTCAAGGGCGAGTACTTCGACGGCGCGCTCAATGCCAGCATCGCGC TGTTTCGCATCGACCAGGAAAACCGCGCCGTCTCGCAGACCGACCTGAGCAGCTGCAGCGACCCGACCAACTGCTACGTCGCCTCGGGCGAAGTGCGCAG CCAGGGCGTGGACATGGAACTGCAAGGTGCACTGACGCCGAACTGGCAGGTCGGTGCCGGCTACACCTATGCCCGCGTGCACACCCTCAAGGACGCTGCC AACCCGGCCAACGAGAATCAGCGCTTTGACACCGACACGCCTGAGCACATGTTCAAGCTGTCGACCACCTACCGCCTGCAGGGGCCTCTGGAAAAAGCCC GCATCGGTGGCAACGTCACCTGGCAGAGCCGCATCTACAACGACTTCACCGTCGCCGACGGCAGCGAGTACCGCCTGGTTCAGGGCTCCTACGCGATCAC CAACCTGATGGCCGGCTACCAGGTCAACCAGAACCTCGACCTGCAGCTGAACGCCAACAACGTGTTCGACCGCAAGTACTACTCTGCAGTCGCCGGCTCC GTGGATTACGCCGGCGACACCTGGGGCACCCCACGCAACCTGATGCTGACGGCCAAGTACAGTTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTGACCCGGCGCAGGGACGCGCCGCTTCGCGATGGCATACTGAGCACTGCCCATTGTGTTCACGATCCTGCAACAGGAACCGCCATGCTCATTCGCCCC GAAACCCCCACCGACTGCCCTGCCATCAGCCGCCTGACCTTGCAGGCCTTCACCGATCACCCACATCACACACCCGGCCAGGCGCCTACCGAGCACCTGA TCATCGAACGGCTGCGCGCGAACGGCACACTGGCGCTGTCCCTGGTGGCCGAAGATGAGGGCGTGATCGTCGGGCAGGTGAGCGTTTCGCCGGTGAGCAT CGAGGGGCGGTTCTCGGGTTGGTATGGCCTGGGGCCGATAGCCGTTGCGCCGGACAGACAGGGGCAAGGGATTGGTGCGGCGCTGATGCGAGATGCGCTT GCCTGCATGCGCGAGCGCGCAGCCGAGGGCATCGTGTTGCTGGGTGAGCCGGCGTATTACCAGCGTTTCAGGTTCAAAGCCTATTCGCAGCTACGCTATC
Amino Acid Sequence
>TonB-dependent siderophore receptor
MPSYLAPTRSLPARNLLAMAVCMAIVTPAVAEDEKPTTLELGATEISSNSLGSTTEGSTSYTTGSMSTATKLPLSLRETPQAVTVITRQRMDDQAMTSIN DVVAATPGLFLDYSSGPGRQTYSARGFDIDNLMYDGIPSGYQGWTVGAQPNLAMFDRVEIVRGATGLVTGSGNPSAAINLVRKRPLAEQKVTLTGAAGSW DDYRGELDASSPLNDSGTLRGRVVASYRDTNSFIDDVEEDHGLFYAVTEADLSDDTTLTLGFSHQKDKTNYFWGAMPTALDGHHMDFSRSYNPGTDWENK DQEIDTLFAEVSHLLANDWKLQVNANYSQQDGVFTGSYQSRWAGLQAPLSRTVYQSKHQENQAGVDGFLSGPFQAFGRTHELVVGASKRIYDMDTWNYSP YDTNYPLNGGKPDFMHTGNSRAVTTQEGVYVTTRLSLADPLKLILGGRLDWYDYDDKESSSADYKVTRNVTRYAGLIYDLDDHHSVYVSYSDIFNPQSYK DASGSPVKPIEGKNYEIGVKGEYFDGALNASIALFRIDQENRAVSQTDLSSCSDPTNCYVASGEVRSQGVDMELQGALTPNWQVGAGYTYARVHTLKDAA NPANENQRFDTDTPEHMFKLSTTYRLQGPLEKARIGGNVTWQSRIYNDFTVADGSEYRLVQGSYAITNLMAGYQVNQNLDLQLNANNVFDRKYYSAVAGS VDYAGDTWGTPRNLMLTAKYSF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site