Pseudomonas plecoglossicida NB2011, L321_17972

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold81, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAGTTCGGCATTGCTGGTGGCCTTGGCACCTACCAGCAACCAGTCGCACGCCGGCATGTCGGCGGCGCTGACATAAGCCTGCACAGGCAACTGCAGCA CACCATGCAGTGCGCTATCGAGTTTCAGGCCCTGCTCACGGACCACGGCATACTCGCTGCGCAGCAGGAAATGCACGTCGAAACCCGCACGAGCCAGCAT CAACCCATAGAAGCCTCCGATGGCGCCACTGCCGATAATACCGATGCGCGGTTTACGCGGGGTCATGCTGATCTCCTGAATAGTTGTGGATGCGCTTTTT TTACACATATTACAGCTTTATGCGCACCCTATAGCAGCACTGGCCCAAATGCCCAGGGAAAAACCCTGCTACAGCAGGCTCAGGCCATTGTCGCGCCCCC TGTAACGCGCTAAGGTTCGGCTCCCCGCTGCGAACATTCTTGCTGCTGGGCCGCACGGGGATTGCTGGCGGCCGGCACCCGTGACCTGACGAGTAACACG
DNA Sequence for Gene
>L321_17972
ATGGCTGATTTACCGATCGATGACCTTAACGTTGCCTCCAACGAGACCTTGATCACCCCCGATCAGCTCAAGAAGGAAATCCCCCTCAGCGCCAAGGCCC TGCAGACCGTGACTGCTGGCCGCCAAGTCGTGCGCAACATTCTCGACGGCAAGGACCATCGCCTGTTCGTCGTGGTCGGCCCGTGCTCCATTCACGACAT CAAGGCCGCGCACGAATATGCCGAACGCCTGAAAGTGTTGGCCGAGGAAGTGTCCGATACGCTTTACCTGGTGATGCGCGTGTACTTCGAGAAACCGCGC ACCACGGTCGGCTGGAAAGGCCTGATCAACGATCCGTACCTGGATGACTCGTTCAAGATCCAAGACGGTTTGCACATTGGCCGCCAACTGCTGCTCGACC TGGCCGAAAAGGGCCTGCCGACCGCCACCGAGGCACTCGACCCGATTTCCCCGCAGTACCTGCAGGACCTGATCAGCTGGTCGGCCATCGGCGCCCGCAC CACCGAATCCCAGACCCACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTCGGCTTCAAGAACGGTACCGATGGCGGCCTGACCGTAGCGATCAACGCC CTGCAATCGGTGTCCAAACCGCACCGCTTCCTCGGCATCAACCAGGAAGGCGGAGTCTCCATCGTTACCACCAAGGGCAACCCGTACGGGCACGTGGTGC TGCGCGGCGGCAACGGCAAGCCGAACTACGATTCGGTCAGCGTCGCCCTGTGCGAGCAGGACCTGGCCAAGGCCAAGATCAAGCCGAACATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCACTGCAACCTCTGGTCATGGAGAACGTCGCCAACCAGATCCTCGAAGGCAACCAGTCGATCATCGGC CTGATGGTCGAGAGCCACCTGAACTGGGGCTGCCAGTCGATTCCGAAGAACCTGGACGAATTGCAGTACGGCGTTTCGATCACCGATGCCTGCATCGACT GGTCGGCCACCGAGAAAACCCTGCGCAGCATGCACGCCAAGCTCAAGGACGTACTGCCTCAGCGCAAGCGCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAAAAAAACAGGGCCGCTTCACGCCCCTCTGCCGACTTGCGGCGCGGGACGTGAAGCGGCCCTGTTTTTTTTCAAGGACTCAGGCCTTGCTCGAATGG CGCTGCTGGCGCTCCATGTAGCGCTCCACATACGAGCAGGAAGGAATCACCGTGTAGCCCATCTGGTCGGCGTACTCCAGGGCCTTTTCGGTCAGCGCGG CAGCGATCCCGCGGCCGCGCAGGGCGTTGGGCACGAAGGTGCGATAAATGTCCAGCGTCTGCTTGCCCAGGTCCATGTACGTCAGGTAGGCACGATGACC GTCCACGCTGGTCTCGAACTGATGACCGGCCTGGTCATGGTGGATGGTCAGCGCTTCATTCATCACTACTCCTCGCAGGCCTTTTCGGCAGACCCTTACC TTAACCGATGGTGGTTTATCCGGCGAAGGAACCTCTACGCCACCTTTGCCCCCTTTGACCGCAAGCCAATTGCAATGGTTCTGCCGGGTCGGGCACCCCA
Amino Acid Sequence
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVASNETLITPDQLKKEIPLSAKALQTVTAGRQVVRNILDGKDHRLFVVVGPCSIHDIKAAHEYAERLKVLAEEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLLDLAEKGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSKPHRFLGINQEGGVSIVTTKGNPYGHVVLRGGNGKPNYDSVSVALCEQDLAKAKIKPNIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQSIPKNLDELQYGVSITDACIDWSATEKTLRSMHAKLKDVLPQRKRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site