Pseudomonas plecoglossicida NB2011, L321_16128

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold79, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCCGTTCCTTCATCTCGCGCGCGGCCTTGTTGGTGAAGGTCATCGCCACGATGTACTGGGCGCGGATGCCGCAGTTCTGGATGAGGTGGGCAATCTTG CGCGTGATCACGCTGGTCTTGCCGGAGCCTGCACCGGCGAGCACCAAAAGAGGGCCGCCGACGTAGTCACGGGCTTCCTGTTGCCTGGGATTGAGTCGGG ACATGCTAGAAACCGGGGGTCGCCAGAAAATAGCCGCGCATTCTAACAGGCATGGGACGGTTGTGGCGCGACCGTCTGACGTCTGAGTCAACGTTTTCTG CGTCCATATCATTAGTCAGACTAATGCTATTCATGGAAAAAATCGGATTTGCTGGTTGAGCGACTTTCGCGCAGGATGCACGTCGAAATGCGTCGGTGCG CTGTGGGCAAGGGATCTGTCTAAAAATGAAAATGATTTTCATTAATGCAGTAGCATATCCGACCTGCCTCGTGTGACCGTCAACGCCCTAAGGAGCCCGC
DNA Sequence for Gene
>L321_16128
TTGTCCACGCCTGTCGAACCTCTGCGTTTGCTGTTGTTGGCCGATGAGCCGGAATGGGCTGCCTTGTTGCGCGAGTGCCTTCTGCCGCTGGGCGACCTGG CAGTTTTGCTGACCGCACCGAACTGGGCAGCGGTCGATACCCTGTTCAGCAATGACCGGCAAGCCGTGATCCTGGCCACGCCGGCCTTGCAGCCGGCGCC GGGGCGCTGCGACCTGCCGACCATCCTCTTGCTCGATCATGAGCCTGTGCAGCCGCCTACGGGTGTCAGCGACTGGCTGGTGCTCGATCATCTCAATGCC GACGCCCTGCGCCGTTCCCTGCGCCATGTGCGCGAGCGCGGCGTGCTGGTGGCCACCCTGCAGCGTCTGGCCGAACAGGACCCGCTCACCGGCATCGCCA ACCGCCAGGGCTTCCAGGCCCTGCTGACGGCACGCCTGGCCGAGAACGAAGGCCGAGGCCTTGCCCTTGGCCACCTGGATCTGGACAACTTCCGCCACGT CAACGATGCGCTGGGCCACCAGGGCGGCGACCGGCTGATCCTGCAGGTGGTATCGCGGCTCAAGCAGCAACTGGAAGCCGGCGACCAGTTGGCGCGCCTG GGCAGCGACGAGTTCGCCCTGTTGATCGATACCCGGCGCGATCCCAACCGAGCCGAATGGCTCGCCGATCGGATCGTCGAGGCCTTGGCCGAGCCTTACT GGATTGACGGCGAAAGCCTGCTGCTCGGCTGCAGCCTCGGCCTTGCCCATGCCCGCGCGCAGGGCGGCGCCGACCCGTTGATGTGGCATGCGCACATTGC CATGCGCCAGGCCAAGGGCAGCCAGGGCTGTACCTTCCACGTGTTCAACGAGCGGATCAACCGCAACGCCCGCAGCCTGGCCGACCTGGAAAGCGAACTG CGCCGGGCCTTGCGCCGGGACGAACTGGAGCTGCATTACCAGCCGCGCCTTAACCTGGCCGATGGCCGCATCGTCGGCCTGGAGGCCCTGGTGCGCTGGC GCCATGCCGAGCGTGGCCTGTTGCCGCCGAGCGAATTCGTGCCACTGGCCGAGCAGAGCGGGTTGATCGTGCCGTTGGGCTACTGGGTCATCTCGCGGGC CCTGCGTGACATGCAGGCCCTGCGCGAAAGCGGGCTCGCGCCCCTGCACATGGCGGTGAACCTGAGCTTCCGCCAGTTCCAGGACAGCCAGCTGCTGGCG ACGCTGAGCCGCCTGATCATCGAGCACGGTGTCGATGCCCGCTGGCTGGAGTTCGAACTGACCGAAACGGCAGTGATGCGCCGCAACGAAGTGGTGCGCC AGACCATGGATGCCCTGGGGCGCCTGGGCGTGCGCTTCTCGCTGGACGACTTCGGCACCGGCTTTTCTTCGTTCGTGCACCTGAACAGCTTGCCCATTAC CCTGCTCAAGGTAGACCGCAGCTTCGTAGCCGAAATGGAGATGCGCGAAGAGAATCGCAAGCTGGTGCATGCCATGATCAACCTGGCACACAACCTCAAC CTCGAGGTGGTGGCCGAAGGTGTGGAGAGCCCGGAGCAGCTGGCCTTGCTACGCGAGTTTGGTTGCGATCAGGTGCAAGGGTTCCTGGTCAGCAAGCCGC TGCCGGTGGTGGAGCTGGTCGAGTATCTGCAGCAAACGTCCGAGCGCAAGCTGGCACAAGTCATCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGCTATCGCCGGCAAGCGGGTTCCCACAGGGGCGACACCGCACCTTGTGGGAGCCGGCTTGCCGGCGACAGGGCTTTGAGATCAAGCCTGGGCAGTCGC TTCAGCGGCCACTCCAGCTTTGCCCAGCATCCGCTTCATCCGCCATTCAAAGCCCAGGGTCAGCGCCACCGAAGCACACGCCAGCCCCAACGCCAGCCCC CACCATACCCCCACAGCGCCGCCACCCAGGGTAAAGGTGAACAGCCAGGCACTCGGCGCCCCGACCAGCCAGTAGCAGCACAAGCCGATCAGGAAAGTGG TCTTGGCATCCTTCAGCCCGCGGATCGAGCCCATGGCGATGGTCTGCACGCCATCGAACAGCTCGAACCAGGCGGCCACCATCAGCAATTGCACCGCCAG CTGGAAGATCGCCGCGAACGCCGGGTCATGCCGGTCGATGAACAACCCCACCAGTGCCTCCGGCAGCAGCCAGAACAAGGCGGCGAAGGCGAACATGATG
Amino Acid Sequence
>diguanylate cyclase/phosphodiesterase
MSTPVEPLRLLLLADEPEWAALLRECLLPLGDLAVLLTAPNWAAVDTLFSNDRQAVILATPALQPAPGRCDLPTILLLDHEPVQPPTGVSDWLVLDHLNA DALRRSLRHVRERGVLVATLQRLAEQDPLTGIANRQGFQALLTARLAENEGRGLALGHLDLDNFRHVNDALGHQGGDRLILQVVSRLKQQLEAGDQLARL GSDEFALLIDTRRDPNRAEWLADRIVEALAEPYWIDGESLLLGCSLGLAHARAQGGADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARSLADLESEL RRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLIVPLGYWVISRALRDMQALRESGLAPLHMAVNLSFRQFQDSQLLA TLSRLIIEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLN LEVVAEGVESPEQLALLREFGCDQVQGFLVSKPLPVVELVEYLQQTSERKLAQVI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site