Pseudomonas plecoglossicida NB2011, L321_15046
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NB2011 genomic scaffold PT1_scaffold77, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCGAGCAGGTGTCCGCCGGTGTGGTGGATGCCGAGGTGCAGGACAAGGCCGTGCTGTTGCGGGTGCTGACCGTCGACGATTCGTCGGTGGCGCGCAAGC AGGTCAGCCGCTGCCTGCAGACGGTGGGCGTGGAAGTGGTGGCGCTCAACGACGGCCGCCAGGCCCTGGACTACCTGCGCAAGCTGGTGGACGAGGGCAA GCGGCCGGAAGAAGAGTTCCTGATGATGATCTCGGACATTGAAATGCCAGAAATGGATGGCTATACGCTGACCGCGGAGATCCGCAGCGACCCGCGTATG CAAAAATTGCACATCTGCCTGCATACTTCCCTGTCCGGGGTATTCAACCAGGCGATGGTCAAGAAGGTCGGTGCCGATGGTTTCCTGGCCAAGTTCAGGC CGGACGACCTGGCCCAGCGCGTGGTCGACCGGATCAAGGCAGCGCATTGAAGCAGCCGGGACAGGCTCCCGGCACCATTGATTGGAAAGAGGCGGCAGTA
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| DNA Sequence for Gene |
>L321_15046
GTGTCTACGGGTAATTTGGAGTTCGAACAGTTCCGGGGCTTCCTGGAGAAAGCCTGTGGCATCCTGCTGGGGGAGAATAAGCAGTACCTGGTTTCCAGCC GTCTCAACAAGCTGATGGAGCAACAGGGCATCAAGAGCCTGGGCGAGCTGGTGCAGCGCATCCAGACCCAGCCGCGTGGCGGTTTGCGCGAGTTGGTGGT CGACGCCATGACCACCAACGAAACCCTGTGGTTTCGCGATACCTATCCGTTCGAAGTGCTGAAGAACAAAGTCATCCCTGAGTTCATCAGGAACAATCCC GGCCAGCGCCTGCGCATGTGGTCGGCGGCGTGCTCGTCGGGTCAGGAGCCGTATTCCATTTCCATGGCCATCGACGAGTTCGAGCGCAGCAACCTTGGCC AGCTGAAGATGGGCGCGCAGATCGTCGCCACCGACCTGTCGGGCTCGATGCTGAACAACTGCAAGACCGGCGAGTACGACAGCCTGGCAATCGCCCGCGG CTTGTCCCAGGAGCGTCTGCAGCGCTACTTCGACACCAAGGCGCCGGGGCGTTGGGCAGTGAAGCCGGCGATTCGCAGCCGGGTCGAGTTCCGCTCGTTC AACCTGCTCGACAGCTATGCGGCGCTGGGCAAGTTCGACATCGTGTTCTGCCGCAATGTACTGATCTACTTCTCGGCGCAGGTGAAGAAGGACATTCTGT TGCGGATTCACAGCACCTTGAAGCCGGGCGGGTATCTGTTCCTGGGGGCGTCCGAGGCGCTCAATGGGTTGCCGGACCATTACCAGATGGTGCAGTGCAG CCCGGGGATCATCTACCAGGCCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTTTTTAAAATGAGCCGAGGGCAGCGATGCAGCCCTCGGCTCATTTTTCGTGGGGCATTCCGGAATATTCTTTCGGTTAAAAGTCCGAAAAGCTGTAGG GCTCAAGGGGCGCAATCTGGGATAAGAAAATGAGGTGCTCTTGAGCTTTTACCTTTTCAACATGGTCAAGCCTGGCTGTTCCTCCAAGCGGCAAGGCGGG AACAAAAGCATACATTTCATCGTGCTTAACTATGCCGAGTCTTTTCTTTATAGGCTCAAACATATCGTCAAAGTCATCAGTTTCTCGATCGCGCATCGCA AAGAAGTTTTGTACATGCCGATCCATGTTGGCGATTTTCCTGTCTTTTCCTATGTAGCTTGACAGGTAGCCAATGATTTTCAGTGAAAACCCGGTTTGCT CTCCAAAAAAATAAAGATCGCCAAAAGCGCTTCGTGCAATCAAATGGTATGTGTCTCTAGCGGCAAGCGCAGTACCCTCAATCCATGAGGCCGCCACTCC
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| Amino Acid Sequence |
>CheR-type MCP methyltransferase
MSTGNLEFEQFRGFLEKACGILLGENKQYLVSSRLNKLMEQQGIKSLGELVQRIQTQPRGGLRELVVDAMTTNETLWFRDTYPFEVLKNKVIPEFIRNNP GQRLRMWSAACSSGQEPYSISMAIDEFERSNLGQLKMGAQIVATDLSGSMLNNCKTGEYDSLAIARGLSQERLQRYFDTKAPGRWAVKPAIRSRVEFRSF NLLDSYAALGKFDIVFCRNVLIYFSAQVKKDILLRIHSTLKPGGYLFLGASEALNGLPDHYQMVQCSPGIIYQAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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