Pseudomonas plecoglossicida NB2011, L321_15026 (flgC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NB2011 genomic scaffold PT1_scaffold77, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCATTCACGGGCTTTCAAGACCTTGGCACAGCTCTTGCTCTACCTTCGCCAACGACATTCCGGTCAACCTTCGAAGGTTTCCCCGACATGAGCATCAGTT TCGACAAGGCCCTTGGCATCCACGAAAAAGCCCTGGGCTTCCGCGCCCAGCGCGCCGAAGTGCTGGCCAACAACATCGCCAACGCCGACACGCCCAACTA CAAGGCGCGTGACATGGACTTCTCGTCGGTGCTCGCCGCCGAGAGCCAGAAGCAGCAAAGCGGTGGCCGCTTCGCCATGGACCGTACCAACAGCCGCCAC ATCGAGGCCGAAGGCCTGGCGATGGCCGACGACACCCTGCAGTACCGCACCCCTACGCAGCCGTCGATCGACCAGAACACCGTGGATGCGCAGATCGAGC AATCGAACTACACCGAGAACGCCATCGGCTTCCAGGCCAGCTTCACCTTGCTCAACAGTAAATTCAAAGGGCTGGTTTCGGCCCTGCGCGGAGAGTAGTC
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| DNA Sequence for Gene |
>L321_15026
|flgC
ATGTCCCTTGCCAGTGTCTTCCATATCGCCGGTAGCGGCATGAGCGCGCAGAACACTCGCCTCAACACCGTCGCCTCCAACATCGCCAACGCCGAGACCG TCTCGTCGAGCATCGACCAGACCTATCGCGCCCGTCATCCGGTGTTCGCCACTACCTTCCAGGACGCCCAGGCCGGCACCAGCCAGTCGCTGTTCGAGGA TCAGGGCGAAGCCGGGCAGGGCGTGCAGGTCAAGGGCATCGTCGAGGACCAGAGCAACCTGGAGGCGCGTTACGAGCCCAATCACCCGGCGGCGAACAAG GACGGCTACGTCTACTACCCGAACGTCAATGTGGTCGAGGAGATGGCCGACATGATCTCCGCCAGCCGCTCGTTCCAGACCAACGCCGAGCTGATGAACA CCGCCAAGAACATGATGCAGAAAGTCCTGACCTTGGGTCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAAGGAATCCAGACCATGGCAGTCGATAGCACCAACGGTGTGAACCTCAACGATGTCCTTTCGGCATCGGGTGTCGGTGCGCCCACCAAGAAGACCACCG ATACCGCTTCCAAGACCGGCTCCGACGCGCTCGGCAAGGACGCGTTCCTGCAGCTGCTGGTTACCCAGATGCAGAACCAGAACCCGCTCGATCCTCAGGA CAACAGCGAGTTCGTCGCCCAGTTGGCGCAGTTCAGCAGCCTCGAAGGCATCACCAACCTCAATGACTCGGTGACCAGCATCACCAACGCCCTGGCCTCG TCCCAGGCGCTGCAGGCTTCGTCGCTGGTCGGGCGCTCGGTGATCGCGCAGAACGACAAGGCGGTGGTCGATACCGCCGAAAGCTTCAACGGCCAGTTCA TCGTGCCGCAGGCGATCAGCGAAGCGAAGATCACCATCAAGGACAAGGACGGCAACACCGTCAAGACCATCGAGCTGGGCGAGCAGAAAGCCGGTTATGC
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| Amino Acid Sequence |
>flagellar basal body rod protein FlgC
MSLASVFHIAGSGMSAQNTRLNTVASNIANAETVSSSIDQTYRARHPVFATTFQDAQAGTSQSLFEDQGEAGQGVQVKGIVEDQSNLEARYEPNHPAANK DGYVYYPNVNVVEEMADMISASRSFQTNAELMNTAKNMMQKVLTLGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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