Pseudomonas plecoglossicida NB2011, L321_14856

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold77, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCATTTCCAGCAGCAGGTGGCCCAGGCTCAGGCCAAGCTGAGTGAGCTGGAATCGTTTCGCGAAGGTTACCAGGCGCAGTGGATCGAGCGGGGCGGGCA GGGTGTCGATGGCAGCTGGCTGCTCAACTACCAGCGCTTCCTGGCCCAGCTGGAAACGGCCATGACCCAGCAGCGGCAGAGTCTGGCCTGGCACCAGAAC AACCTCAAGAACGCCCGAGGCACCTGGCAGCAGGCCTATGCCCGGGTCGAAGGGCTGCGCAAGCTGGTGCAGCGGTACATGGACGAGGCGCGGCGGGCCG AAGACAAGCGCGAGCAGCGCTTGCTGGATGAACTGTCGCAGCGGTTGCCCAGGCAGGGGCATCTGTAACCCGCTCTGGCCCTATCGCCTGTAGGAGCCGG CTTGCCGGCGATAGGGCCAGAGCAGGCAACCTTGATACTCGACCTACTGCCTGCTAAACCTTGAACTGTTGCACCCGCCATCATCGAAGGAATCGCTAGC
DNA Sequence for Gene
>L321_14856
ATGGCCGTCGAGACCGATTTTTCGCAGGAAGGAAAAAAGCTCACGATCAAGATCAAGGGGCGTTTCGATTTCGGCAAGCACCAGGAGTTTCGCGAGGCCT ATGAGCGCCAGCCCATGCGGCCCGACTCGGTGGTAGTCGACCTCAGGGACACCACCTACCTGGACAGCTCTGCGCTCGGCATGCTGCTGTTGCTGCGTGA CCACGCGGGCGGCGACGAGTCGGACGTGCGCGTGGTGCATGCCAGCTCCGATGTGCGCAAGATCCTGGCGATTTCCAACTTCGAAAAGCTGTTCGACATC AGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCCCAGATGCCGGTCGAACAGGCGTTGACCGTGCTGGTGGCCGAGGACAGCGCCACCGATCGCCTGCTGCTGGCGCAGATCGTCCGGCGTCAGGGGCA TCAGGTGTTCACCGCAGAGAACGGCGAGCAGGCCGTGGCGCTGTTCGCCGAGAAGCGACCACAACTGGTCTTGCTTGATGCTCTCATGCCGGTGATGGAC GGGTTCGAGGCGGCGCGGCAGATCAAGGTACTGGCCGGCGAGGCGCTGGTGCCGATCATCTTCCTGACTTCGCTGAACGAGGAGGCTGCCCTGGTGCGCT GCCTGGAGGCCGGGGGCGACGACTTCATGGCCAAGCCTTACAGTGCGGTGATCCTTGGCGCCAAGATCCGCGCCATGGACCGCCTGCGCCGGCTGCAGGC GACCGTGCTCGAGCAGCGCGACCAGATCACCCGCCATCACCACCACCTGCTCAACGAGCAGCGGGTGGCCAAGGCGGTGTTCGACAAGGTCGCCCATTCC
Amino Acid Sequence
>anti-sigma-factor antagonist
MAVETDFSQEGKKLTIKIKGRFDFGKHQEFREAYERQPMRPDSVVVDLRDTTYLDSSALGMLLLLRDHAGGDESDVRVVHASSDVRKILAISNFEKLFDI S
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site