Pseudomonas plecoglossicida NB2011, L321_14826 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold77, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGTCAATTTCGAGTACATGAACTCCGAGGTCAACCCGGCCATGGCCAACATCGTCGGGCCGAGCGAGGCAGTGGTGGTCTCGACCTTCCACATCGAAC TGGACGGCGGTGGTGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGGGAAATGCTCGATGCCGGCTTCCAGTCCGACCTGGACGA CCAGGACGAGCGCTGGGTCAAGGCCCTGCGCGAGGACGTGCTGGACGTGTCCGTGCCGCTGACCGCCACGGTCGCCCGGCGCCAGCTGAAGCTGCGCGAC ATCCTGCACATGCAGGCCGGCGACGTGATCCCGGTGGAGCTGCCCGAGCACCTGGTACTGCGCGCCAATGGCGTGCCGTCGTTCAAGGCGCGCCTGGGCT CGCACAAGGGCAACCTGGCCCTGAAGATCATCGACCCGATCGAACGCCGCTGACGGTGTGCCGGTCGCTCTCTACGAATTGAATGCCTGTCGAGGACATC
DNA Sequence for Gene
>L321_14826 |fliN
ATGGCTAACGAAAACGAGATCACCTCCCCCGAGGACCAGGCCCTGGCCGACGAGTGGGCCGCAGCTCTGGAAGAAACCGGTGACGCCGGCCAGGCCGACA TCGACGCGCTGCTTGGTGGCGACACTGGCAGTGGCCGCCTGCCCATGGAAGAGTTCGCAAGCTCGCCACGGCCGAAGGAAAACGTCAGCCTGGAAGGCCC GAACCTGGATGTGATCCTGGACATTCCGGTGAACATCTCGATGGAAGTCGGCAGCACTGAAATCAACATCCGCAACCTGCTGCAGCTCAACCAGGGCTCG GTGATCGAGCTTGATCGCCTGGCCGGCGAGCCGCTCGATGTGCTGGTCAACGGCACGCTGATCGCCCATGGCGAGGTGGTCGTGGTCAACGAGAAGTTCG GCATCCGCCTGACCGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAAAGGCACGATGCGGGCCGTGACGGCCCTGGTTGCGCTGCTGGCCAGCGAAGTGGCCATCGCCACGGCCACTGTCACGCCGGCTGCGCCACCCGCCG CCGCGCCTGGCAGCCTGGGCGGGCAGTTGGCGCAGATGGTGTTCGGTCTGCTGCTGGTGGTCGGGCTGATCTTCTTTCTCGCCTGGTTGCTGCGCCGCAT GCAGGGCGCCGCGCCCAAGGGCGGCCAGGTGATCGAGATCGTCGGCAGCCGCGCCCTCGGCCCGCGTGACCGGCTGCTGCTGGTGCAGGTCGGCAAGGAG CAGATTCTCATCGGCCACACCCCCGGCAGCATCGAGGCCTTGCATGTCATGGCCGAACCTGTGGAAGTGCCCGCCAGCGCCCGCCAGGCGACGCCGGAAT TCGCCCAGCGGCTGATGGAGCTGATGGGCAAGGATCAGAAGGACAAGCAGTGATGAGCGGCGCCATGCGCATAGTGTTGACCCTGGTGCTGCTGCTGGCC
Amino Acid Sequence
>flagellar motor switch protein
MANENEITSPEDQALADEWAAALEETGDAGQADIDALLGGDTGSGRLPMEEFASSPRPKENVSLEGPNLDVILDIPVNISMEVGSTEINIRNLLQLNQGS VIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site