Pseudomonas plecoglossicida NB2011, L321_13386

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold76, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTTCGAGCTTTCGCTCGTCGGGCGACTCGACAAGGAGTGAGCCCCAACCCATGCCTCGATCTCCAGGACAGGGAAGTTTGTTCGAACGGCTTACTGCAG ATCCAGCACAGCGGTGTTCTCGCACGCAGCAGTCTGCGGCAGGAGAGCGCATTCGAGCCATCAAGTACAACCTCGAGCAATTGCTCAACTCGCGTCGGGG AGGCTCGCAAAGCTGCCCCGCGCTGGGGCTGCCCGACATGAATGACGCCGCTGCGGGGCAGTTGGAACTGCGAAGCCAGATTTGTCGGGAAATCCAGGAA TTGGTGGCGTCCTTCGAGCCCCGGGTCCTGGTCACCGACGTCCGCCCGCTCGCTGCCAGTGAGCATTCGCAGGGGTTGTGCTTCCGATTGCATTGCCGGG TTCCGCTCGAGGATGCCGCCGAGCAAGTGCAGATAGATCTGCTGGTGCACCAGCGACAACAACGGATTCAGGTGATGTGAGCCATCGCCAAGGGGGCTAG
DNA Sequence for Gene
>L321_13386
ATGCCACTGAAAAGCAAGTTTCGGGAAGAATTGGACTACCTTCGCCGGCTCGGGCGAGTGTTCGCGCGCAACAATCCACAGCTGGCAAGGTTCCTCGGCG ATGAAGCGACCGACCCGGACGTCGAGCGGCTGCTCGAGGGCTTTGCCTTCCTGACCGCCAAGCTGCGCCTGAAAATCGAGGATGACTTCCCCGAACTGAC GCATCCGTTGCTGCAGTTGTTATGGCCCAACTATCTGCGACCACTGCCCAGCAGCACGATCATCCAGTTTGCGCCAGCGGACCGCGCCATTACCGTGCGT CACCGCATCGCAAAAGGGAGCCGCATTCTGTCGCGCAAGGTCGAAGGGATGCGCTGCGAGTTTCGCACCTGTGCGGACGTCGATATCTACCCACTCACGA TCCTTGAAGTCAGCGATGCGCACTCCTTGGAGAAGTCGACGGTGCATGTGGATCTCGCCTCGCTGAGCGACAATCCTCCCAGCACTTACGACTGCGACCG GCTGGACTTCTACCTGAGCGGTAGCGATTACAGCGCCATGACCTTGTATCTGTGGCTGTCGAAATACCTGGGCGACGTTCGCCTGGAGTGCGATGGCGTT GTCAAGCACATACCGGCCAACCACCTTGTATTCCCGGGTTTCGACTCCGAGCAAGCACTCCTTCCATACCCGCAGAATGCACTGGAAGGCTACCGAATCC TGCAAGAGTACTTCCTGTTCCCACGCAGATACTTCTTCTTCGGCATCCCCGGATTGCAATCGCTCTGGCCGAATCACCGCATCGAACGCATACGACTGGA GTTCAATTTCAACCGTCCCTTGCCCCGCGACATGCGGGTGCATACCGGTGACCTGGCGCTGCACTGCGCACCTGCAATCAATCTCCTGAAACACGAAGCT GAGCCTGTGAGGTTGAACGGGAAGACCGTCGACTATCGCCTTCGGCCTTCAGGACAGAGGCCGGACGCCTACGAGATTTTCAGTATCGATCGCGTCGAAG GCTGGAAGAGCGGAACCTCGGGTCACCCGGGTACCTGGCTTCGCACCTATCAGTCTTTCGAGTCGCTTCGCCATCAAATCGACTTCGAGCTCGGCAACAC CGTCCTCTACTACCGCACTCGGCTCGCACCCGCGATGGTGAACACTGGCGTAGACCATCGGGTGTCATTCGTACGCGGCGACGAGCAGCACTACATCGGG CGAGAGGAGACCGTCTCCTTTTCCCTGACATGCACAAACCGCGACTTGCCGCTGGCATTGGCGGTAGGCGACATCTGCGTCCCTACACCCGAGATCCCGA ACTTCGTCTCCTGTCGCAACCTGATCGCGCCAACACCGTCGTATCGCCCTGTACTCGACGGGGACCTGCAATGGACATTGATATCCAATCTGTCGCCTAC CTACCTGTCCCTGGCATCACCTGCCTCGCTGAAGGCAGTGATTCGTGCCTACGACTTCGCAGCCCATCATGACATCCAGCGCGCTCGCGCTACCCAGATG CGGCTGGACAGCCTGCTGGAGGTGACTTGCACCCCGGTCGATCGCATGTTCAAGGCGCTTCCTGTGCGTGGACTGCGCACCCTCGTCAAGCTCGATCAGG ACGGATTCTCGTGCGAAGGCGACCTCTATCTGTTCGGCACGGTACTGAGTCACTTCCTGGCGGTTTTCAACAGCATCTCGTCATTTCACGCGCTGGAAGT TATCAACATCAAGAATCAGGAGCATTACAAATGGCCGTTACGCACCGGCACACAGCCTCTGACTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGACCAACTGCTTGACGAGGCCCGCAGTCACGACTTCTTCAACCTGCTCGAGCGCCTGCACGGCTTGCATGGCGAAGACCTGGAATCCGGCGATGCCTA TGCTGCAGAACGGCAGCTCATCCGCTTGAGCAACTACGCGGGCATGGGGTTTCCAGCCTCGGATGTATCGCTGGCGCGCCGTCTCGAGGAGGGCTTGCCA CACCAGTATCTGGTTCAGGCAACGTTCTTCGGCATGCATGGTCCAGACTCTCCGCTGCCTTCGTACTATCTGGAACGTCTTGCCTTCGAGGCCGGTCAGG GTGACGGCGTTCGGCCGGCGTTCTTCGACTTCTTCAACCACCGTCTGTTGACCCTGCTGCATCAGGCCTGGCGCAAGTACCGCTACTACATCCGCTTTCG TGCCGGTGCCACCGACCAGATGTCCCAGTATCTCTTCGCGCTGGTGGGACTCAAGGATGAAGCCGTCCGAGGTATCACGCCCATCGCCTGGAGCCGGCTG
Amino Acid Sequence
>hypothetical protein
MPLKSKFREELDYLRRLGRVFARNNPQLARFLGDEATDPDVERLLEGFAFLTAKLRLKIEDDFPELTHPLLQLLWPNYLRPLPSSTIIQFAPADRAITVR HRIAKGSRILSRKVEGMRCEFRTCADVDIYPLTILEVSDAHSLEKSTVHVDLASLSDNPPSTYDCDRLDFYLSGSDYSAMTLYLWLSKYLGDVRLECDGV VKHIPANHLVFPGFDSEQALLPYPQNALEGYRILQEYFLFPRRYFFFGIPGLQSLWPNHRIERIRLEFNFNRPLPRDMRVHTGDLALHCAPAINLLKHEA EPVRLNGKTVDYRLRPSGQRPDAYEIFSIDRVEGWKSGTSGHPGTWLRTYQSFESLRHQIDFELGNTVLYYRTRLAPAMVNTGVDHRVSFVRGDEQHYIG REETVSFSLTCTNRDLPLALAVGDICVPTPEIPNFVSCRNLIAPTPSYRPVLDGDLQWTLISNLSPTYLSLASPASLKAVIRAYDFAAHHDIQRARATQM RLDSLLEVTCTPVDRMFKALPVRGLRTLVKLDQDGFSCEGDLYLFGTVLSHFLAVFNSISSFHALEVINIKNQEHYKWPLRTGTQPLT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site