Pseudomonas plecoglossicida NB2011, L321_12734

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold75, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGCTGCATGACATGTCGCAGTTGAGCGATGCCCTTTCCGCCGAGTCGGCACCTGCCGCGCACCAGCAAGCGCCTGATGCGCCAGTGGTCCAGGCACTG GACGGCCAGCAAATCAAACTACCGGGCTACATCGTGCCGCTGGAAGTCAGCGAGGAAGGCCGTACCACCGAATTCCTGCTGGTACCCTACTACGGCGCGT GCATCCATGTGCCGCCACCGCCCGCCAACCAGATCGTGCACATATTCAGCGAAATGGGCGTGCGTGTGGAAGACCTCTACCAGCCTTACTGGATCGAAGG AAAGCTGCGCGTTAGAGGCTCTCGCAGCGAGTTGGCCGATGCCGGTTACCAGATGGACGCGGAAAAGATCTACGCTTATGCGCTGAAGTGAGAACTGTTT CGAATTCGTGAGTGCGCTTCTTTGAGCTGGGTCAACCTTTATGTTGATCCAGCTCCGTAACATTGGACTACTCAATTAATAACGTCCTTTCGGAGCTTCC
DNA Sequence for Gene
>L321_12734
ATGAACAAGTCTTTGCTCGGCGCCTCGCTTGCGGCCCTTGCGCTCGTCGCCCCTGTCGCCCACGCCCACAAGGCGGGTGACATGATCCTGCGCGCGGGTG CCATCACCACTGCCCCGAACGAGAGCAGCGGCGATCTGAAGTTCGACGGCAACAAGGTGTCGGGCACCAAGGCTACTCTGGACAGCGACACCCAACTGGG CCTGACCTTCGCCTACATGCTCACCGACCATGTCGGCATCGAGCTGCTGGCGGCCACGCCGTTCCAGCACGAAGTAGGCGTCAAGGGCCTGGGCGGCGGG CTGGATGGCAAGCTGGCGGACGTCAAGCAATTGCCTCCGACCCTGTCCCTGCAGTACTACCCGATGGATCCGAACTCGCGCTTCCAGCCGTATGCCGGTA TCGGTATCAACTACACCCTGTTCTTCGATGAAGACCTGACCAGCGAGCGCAAGCAGCAAGGCTTCAGCAACCTCGAACTGCAGGACTCGGTCGGTATCTC CGGCCAGCTGGGCATGGACTACATGATTACCGACAACATTCTGTTCAACGCCTCGGTCTGGTACGTCGACATCGACACCAAGGCCAGCGTCGACGGCCCG ACTGCACTGGGCTACAGCAAGACCAAGGTCAACGTGGATGTCGACCCGTGGGTCTACATGGTGGGTCTGGGCTACAAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTTGAGCACTGCAGGGCGGCTTCGGCCGCCCTTTCTGTTTTTGGCTACCGGCTGTAAAGCTGCCCCTGGGGAATCACCCCTTGCCGAGCAGCCGCGCCAA GCCCTCGACCATCGAGGTCGGCTCGGGGAAATCGAAGCGCGCCAGCAAGCGTTGGTTATCCGCCCGCGAATGGCGGATGTCACCCGAGCGCGCCGGGCCA TGGCTTACCGCAGGCAAGCTGCCCACTACCTGCTCCAACGCCTTGAGCAATTGGTTCAGCGAAGTCGCCTGGTTCAGGCCGATGTTCACCGCACCTTCCT CCACCTGCGATTGCTCCAGCGCTTGCACCATCACCTGCACCAGATCGCCCACGTAGAGGAAATCGCGGGTCTGTTCGCCATCTCCGAACACCCTGATCGG CAAGCCCTTGGTAGCCCGCTCGCTGAAGATGCTGATGACCCCGGAATAGGGCGAAGAAGGGTCCTGGCGCGGCCCGAAGATGTTGAAGAAGCGGAACACC
Amino Acid Sequence
>OmpW family protein
MNKSLLGASLAALALVAPVAHAHKAGDMILRAGAITTAPNESSGDLKFDGNKVSGTKATLDSDTQLGLTFAYMLTDHVGIELLAATPFQHEVGVKGLGGG LDGKLADVKQLPPTLSLQYYPMDPNSRFQPYAGIGINYTLFFDEDLTSERKQQGFSNLELQDSVGISGQLGMDYMITDNILFNASVWYVDIDTKASVDGP TALGYSKTKVNVDVDPWVYMVGLGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site