Pseudomonas plecoglossicida NB2011, L321_12025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold73, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCCCGGCGCCCAGGGCGGCCCGCTGATGCACGTGATCGCCGCCAAGGCCGTGTGCTTCAAGGAAGCGCTGGAGCCCGAGTTCAAGAGCTACCAGAAACA AGTGATCGAAAACGCCCAGGCCATGGCCGAAGTGTTCATCGATCGTGGCTACGATGTGGTGTCCGGCGGTACCGACAACCACCTGTTCCTGGTCAGCCTG ATCCGCCAGGGCCTGACCGGCAAGGACGCCGACGCTGCCCTGGGCCGTGCGCACATCACCGTCAACAAGAACGCCGTGCCGAACGACCCGCAGTCGCCGT TCGTCACCTCGGGCCTGCGCATCGGCACCCCGGCGGTCACCACCCGCGGCTTCAAGGTCGCGCAATGTGTCGCCCTGGCCGGCTGGATCTGCGACGTCCT CGACAACCTCGGTGACGCCGACGTCGAAGCCGATGTGGCGAAGAACGTCGCTGCCCTGTGCGCCGACTTCCCTGTTTACCGCTGAGTGGAGCAGACGACC
DNA Sequence for Gene
>L321_12025
ATGCAACGCTACTCGGGCTTCGGCCTTTTCAAGCACTCCCTCAGCCACCACGAGAACTGGCAGCGCATGTGGCGCACGCCGACCCCGAAAAAGGTCTATG ACGTGGTCATCGTCGGCGGTGGCGGCCATGGCCTGGCCACGGCCTACTACCTGGCCAAGGAACACGGCATCACCAACGTCGCGGTGATCGAGAAGGGTTA CCTGGGCGGCGGCAACACCGCCCGTAACACCACCATCGTGCGTTCCAACTACCTGTGGGACGAGTCGGCGCAGCTGTACGAGCACGCCATGAAACTGTGG GAAGGCCTGTCCCAGGACATCAACTACAACGTGATGTTCTCCCAGCGCGGCGTCTACAACCTGTGCCACACCCTGCAGGACATCCGTGATTCCGAGCGCC GGGTCTCGGCCAACCGCCTCAACGGCGTCGATGGCGAGCTGCTCGATACTGCCCAGGTCGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCG CTACCCGATCCTCGGCGCGACCGTTCAGCGCCGTGGCGGCGTCGCCCGTCACGACGCCGTGGCCTGGGGTTATGCCCGTGCCGCCGACGCCCTGGGCGTG GACCTGATCCAGCAGACCGAAGTGATCGGTTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTCGAAACCAACAAGGGCTTCATCGGCGCCAAGCGCGTCG GCGTGGTCACCGCCGGCAACTCCGGGCACATGGCCAAGCTGGCCGGCTTCCGCCTGCCGCTGGAATCGCACCCGCTGCAAGCGCTGGTATCCGAGCCGAT CAAGCCGATCATCGACAGCGTGATCATGTCCAACGCCGTGCACGGCTACATCAGCCAGTCCGACAAGGGCGACCTGGTGATCGGTGCCGGTATCGACGGC TGGGTCGGCTACGGCCAGCGCGGTTCGTACCCGGTGATCGAGCACACCCTGCAGGCCATCGTCGAGATGTTCCCGAACCTCTCGCGCGTGCGCATGAACC GTCAGTGGGGCGGCATCGTCGACACCACCCCGGACGCGTGCCCGATCATCTCCAAGACCCCGGTCAAGAACATGTTCTTCAACTGCGGCTGGGGTACTGG CGGCTTCAAGGCCACCCCGGGCTCGGGCAATGTCTTCGCGGCGAGCCTGGCCAAGGGCGAGATGCACCCGCTGGCTGCGCCTTTCTCCATCGACCGCTTC TACAACGGCGCACTGATCGACGAACACGGCGCCGCCGCTGTCGCCCACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGGAGCCACCGTCATGTTGCATATTTTCTGTCCCCACTGCGGCGAGCTGCGCTCCGAAGAAGAGTTCCACGCCTCTGGCCAGGCGCACATCGCCCGCCC GCTGGACCCTAACGCCTGCTCCGACGAGGAGTGGGGCACCTACATGTTCTTCCGCGACAACCCGCGCGGTATCCACCATGAACTGTGGGACCACGTCGCC GGCTGCCGTCAGTACTTCAACGTCACCCGCGACACCGTGACCTACGAGATTCTGGAAACCTACAAGATTGGCGAGAAGCCGCAAGTGACCGCCGCCGGCA AGCAGAACGCTGCACCGTCGACCGTCAAAGGCCAAGGGGAGAAAGTATGAGCCAGACCTATCGCCTCGCCAGCGGCGGCCGCATCGACCGCAGCAAGGTC CTGAACTTCACCTTCAACGGCAAGACCTACCAGGGTTATGCCGGTGACACCCTGGCCGCCGCGCTGCTGGCCAACGGCGTCGACATCGTCGGCCGCAGCT
Amino Acid Sequence
>sarcosine oxidase subunit beta
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVIEKGYLGGGNTARNTTIVRSNYLWDESAQLYEHAMKLW EGLSQDINYNVMFSQRGVYNLCHTLQDIRDSERRVSANRLNGVDGELLDTAQVAAEIPYLDCSKNTRYPILGATVQRRGGVARHDAVAWGYARAADALGV DLIQQTEVIGFRKENGAVIGVETNKGFIGAKRVGVVTAGNSGHMAKLAGFRLPLESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG WVGYGQRGSYPVIEHTLQAIVEMFPNLSRVRMNRQWGGIVDTTPDACPIISKTPVKNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSIDRF YNGALIDEHGAAAVAH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site