Strain | Pseudomonas putida NB2011 genomic scaffold PT1_scaffold65, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCTGGCCCTGGGCCTGCTCAGTGCCTGGTTCTACCGCCGCTCCCGACACGCCTGATGACCCTCGATACACCGCTGCCGGCGCTGTATGCCGGCTTCG GCTGCCGTCGCGGCTGCCCGGCCGATGTCCTCGACAGCCTGTTGCGCCAGTCCCTGTCCAGCCAGGGACTGCCGCTGGCCGCCTTGCACGGCATTGCCAG CATCAGCCTGAAGGCCGATGAACCGGGGCTGCAGCAGCTGGCCCGGCGCCTCGGCTTGCCCTTGGTGCTGTTCGACGCAAGCCAGCTGCAAGCATTCGAA TACGCGCTGAGCCATCGCTCGCCGCTTGCCTACTCGCACAGTGGCTGCTGGGGTGTCGCGGAAAGCACCGCACTGGCCCTGGCCCACCGCGAACTCGGCT CGGCCAGGTTGCGAGTCACGCGGCAAAGCCAGGGGCCGGCTACCGTCGCCCTGGCCTGCGGCGGATAATCGCTTCAACCATTCTTCTGCAAGGAACTTCC
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DNA Sequence for Gene |
>L321_08220
ATGACGGTCTACTTCATCGGTGCCGGCCCTGGCGACCCGGAACTGATTACAGTGAAGGGGCAGCGCCTGATCCGGCAGTGCCCGGTCATCATCTACGCCG GCTCCCTGGTACCGGCCGCAGTACTCGAAGGCCACCACGCCGAGACCGTGATCAACAGCGCCGAACTGCATCTGGAACAGATCATCGATGCGATCCGTGC CGCCCATGCGCAGGGCCAGGATGTCGCGCGTGTTCACAGTGGCGACCCCAGCCTGTATGGCGCCATCGGCGAACAGATCCAGCGTCTGCGTGAACTGGGG ATCGACTACCAGATCGTCCCGGGCGTCACCGCGACAGCCGCCAGTGCCGCATTGCTCGGTTGCGAGCTGACCCTGCCGGATGTGGCGCAGACGGTCATCC TGACTCGCTATGGCGACAGCTCGCCCATGCCGGCGGGCGAAAAACTGAGCGACCTGGCGCGCCATCGCGCGACCCTGGCCATTCACCTCGGGGTCAGGCA TCTGCCCCGGATCGTCGAGGAACTGCGCCCCCACTATGGCGCTGACTGCCCTGTCGCCGTGGTTCATCGGGCCACCTGGCCGGACCAGGACTGGGTTCGC GGTACCTTGGCCGACATCGTCGAGCAGGTCGCGGCAAAGGGCTTTCGCCGTACCGCGCTGATCCTCGTCGGCCACGTGCTGGGCGACGCGCCGTTTGCCG CCTCGGCTCTGTACCGCGCCGGCCACGCGCATCTCTACCGCCCCGGCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCATTGCCAATGGCAGGCCAGCCATAGCAGACTCCGGGCTTCATCCTCTTAATAACGGAGTCGCGCCCATGCTGGAACTACGCCCCAATTGCGAATGCTG CGATGCCGACTTGCCGGGCGACAGCTGCGAGGCGTTCATCTGTTCGTTCGAATGCACGTTCTGCCGCAACTGTACCGAAACGCGCTTGCAAAGCCGTTGC CCGAACTGCTCTGGCCAGTTGCTGCCGCGCCCGACACGGGTTGGCCTTGCGTTGACTGACAATCCTGCTTCGACGCATCGCGTGCGCAAACCCCATCCCG CCTGCAAGTGATCACCCGCCATCGCCATGCCTGGCGATGGCTTCCTTGACGTGTTATAGGATTTTTCTACAACACCGACACACTTGTTCAACAGTTCTAT ACTCGCCATTACCAAGGAACCGGAATGGTCGTATCGTGCTGCGCTGCAGAAATAACTTGCAGACGTATTCCTGATTCTTCACAGGAAACGGACCACATTC
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Amino Acid Sequence |
>precorrin-4 C(11)-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIRQCPVIIYAGSLVPAAVLEGHHAETVINSAELHLEQIIDAIRAAHAQGQDVARVHSGDPSLYGAIGEQIQRLRELG IDYQIVPGVTATAASAALLGCELTLPDVAQTVILTRYGDSSPMPAGEKLSDLARHRATLAIHLGVRHLPRIVEELRPHYGADCPVAVVHRATWPDQDWVR GTLADIVEQVAAKGFRRTALILVGHVLGDAPFAASALYRAGHAHLYRPGE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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