Pseudomonas plecoglossicida NB2011, L321_06104
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NB2011 genomic scaffold PT1_scaffold57, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCAGGACATCCTGGTGCTCGCGCATTTCTTCATGCAGCAGGCCTGCACGCAGATCCAGCGCCCGCCGTGCCGGCTGACGCCCGCCACCCATTCGGCGC TGCTGGCCAACCCCTGGCCGGGCAACGTGCGCCAGTTGCAGAACGTGATATTCCGCGCCGCAGCCATTTGCGAAGGCAACCTGGTGGACATCGGCGACCT CGACATCGCCGGGACTTCGGTGGCACGGGGGCAGGATGGGGAAGTGGCGAGCCTGGAACAGGCGGTGGGCGACTTCGAACGGGAACTGCTGCAGCGCTTG TACGCCAGCTACCCGTCGACACGGCAGCTGGCCGGGCGCCTGCAAACCTCACATACCGCGATTGCCCAGCGCCTGCGCAAATACGGCATTCCGAAAACTA ATCCCTAAGCTTTTTCAGACTTCCCCTACACATATACAGGCAGTTTCGCCACGAAAATGGAGGCCCCGTTCACGTTGCTGACATAACAAAGAGTTACCTG
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| DNA Sequence for Gene |
>L321_06104
ATGCTTGAACTCGATTTCTATGGAACGCTGGTCGCCGCCTCACTGGTCCTTCTACTTGGGCGCGGCCTCGTCACCCGCGTCACCTTCCTGCGTATCTACA ACATTCCAGAACCGGTAGCCGGCGGCCTGGTGGTTGCCTTGATACTGCTGGCCCTGCGCAGCTTCGATGTGCAGGTGCAGTTCGACACGTCGCTGCAATC CCCGCTGATGCTCGCCTTCTTTGCCACCATCGGCCTGAATGCCGACCTGGCCAGCCTGAAGAAGGGCGGCCGCGTCGTGGCTATCTTCCTCTTTGCGGTC ACCGGCCTGCTGGTGGTGCAGAACGCCATGGGCATCGGCCTGGCCACGGCATTGGGGCTCGACCCCTTGATGGGCCTGCTGTCAGGTTCGATTTCCCTGG CGGGCGGTCATGGCACAGGCGCTGCCTGGGGTGCGACTTTCAGCGAAAAGTACGGGCTTGCCTCCGCTTCGGAACTGGCATTGGCTGCCGCGACATTCGG CCTGGTCCTCGGCGGCCTGATTGGCGGACCCGTCGCCCGCCTGCTGATCAGCCGCGTGCAGACACCCGGCCTCGAACAGGAAACACCCCGCGTGCCCAAA GGCTTCGAACAGCCGAACAAGGAACGTCTGATCACGCCTTTTTCAATGATCGAGTCCCTCGCACTGATCGCGATCAGCCTGATGGGCGGCTCCTTGCTCA ACGGCCTGTTGCTCGGTACTTCGTTCGAACTGCCGACCTTCGTCTGTGTCCTGTTCGTAGGCGTCGTGGTGCGCAACGGGCTTGCAGCGATCGGCCTGTA CCAGGTGTTCGAGCGGGAAGTCTCGGTGCTGGGCAATGTCAGCCTGTCACTGTTCCTGGCGATCGCCCTGATGTCGCTGAAGCTGTGGGACCTGGCGGCC CTGGCGCTGCCGTTCTTCATCATCCTGGCGGTGCAGACGCTGGTGATGGCGTTGTTCGCGATATTCGTGACCTTCAGGGTCATGGGCAGCAACTACGATG CGGCAGTACTGGCGGCCGGGCACTGTGGTTTCGGCCTGGGCGCCACACCGACCGCCATTGCCAACATGCAAGCGGTGACGCAACGCTACGGCCCTTCGCA GATCGCGTTTCTGGTGGTGCCGATGGTGGGCGCGTTCTTCATCGACATCATCAATGTGATCGTGATCAAGTTGTATCTGGCATTGCCTTTCTTCGTCGTG CCCTTACCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGGACTCGTTTGAATTCCAAAAAATATGTCTTGCATCGAGGCGGTATCACAACAGCTACAGATACCGCCCCGATCATTGAAGGTAATGCAGATGGCAAA TCGACGAAGACTACTCAGCTTTGAAGCCCGGAAGACCTTGCTCAGCCCGCCACGCTTTCACTACCTGTACTATTTCCCCAGGGTCATCTTTCATCCCATG CCTAGTCGGATGAAAAATCAAACTGGCACCTAAGGGGTGCTCAACCATTTTCTCGAACTCAAGAATTGCTTTAGTATGCGAACGCTCATTAGGGTAAATA CGAGGATCGGCATTATATATACCCGCTACAAATTCAAAGAACGCTCTTTCCGTGTAATCTGATATTTTCACCATTTCAATCACCCCTATGAAACTTGATA TGAAATTTTGGCGATAGGATCACCATATTATCTATATCGTATACGCCTCCACCGTCGGCAATCCTTTGCTTATGGTGAATTTCATATTTCACCCTACCTC
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| Amino Acid Sequence |
>sodium/glutamate symport carrier protein GltS
MLELDFYGTLVAASLVLLLGRGLVTRVTFLRIYNIPEPVAGGLVVALILLALRSFDVQVQFDTSLQSPLMLAFFATIGLNADLASLKKGGRVVAIFLFAV TGLLVVQNAMGIGLATALGLDPLMGLLSGSISLAGGHGTGAAWGATFSEKYGLASASELALAAATFGLVLGGLIGGPVARLLISRVQTPGLEQETPRVPK GFEQPNKERLITPFSMIESLALIAISLMGGSLLNGLLLGTSFELPTFVCVLFVGVVVRNGLAAIGLYQVFEREVSVLGNVSLSLFLAIALMSLKLWDLAA LALPFFIILAVQTLVMALFAIFVTFRVMGSNYDAAVLAAGHCGFGLGATPTAIANMQAVTQRYGPSQIAFLVVPMVGAFFIDIINVIVIKLYLALPFFVV PLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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