Pseudomonas plecoglossicida NB2011, L321_00702 (ihfB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold14, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTAGTCAGGCCATGAATGGATTGATTCGATAGAGATTTGCAGCATGTAAATAGCTGCGAGGTGTGGTCGGGGGTGCCTGTCGTGAGCTTTGTAGGGTGGC GAAGACCGAGCGCCGCCCGCGCGGCGCATCGCGAGCTGCGCTCGCTCCTACGTTTGTTTCGGGCCAATCATGTCTGGGGATTTGCGCGCGGTCGCCTTGG TGCAGGGCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGTCACAGGTGTTACTGGCCAGAAATAAACGTAGGAGCGAGCGCAGCTCGCGA TGCGCCGCGCGGGCGGCGCTCGATCTCAATCCCGCCACACCCCTTGCGCCATGCGCATCCCAGCCCAGCCACGCCATATTTCATTTCATTTTGTTCTTGA ATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTCCCCAGCGTGCTACAACCTGATTAAGCAATGATCTAGCTGCTTGATAACGAAGGGAAAAAT
DNA Sequence for Gene
>L321_00702 |ihfB
ATGACGAAGTCGGAGCTGATCGAACGTATTGTCACCCATCAGGGGCTGCTCTCGTCCAAGGACGTCGAGCTGGCCATCAAGACCATGCTTGAACAGATGT CCCAATGCCTGGCAACCGGCGATCGTATCGAGATCCGTGGTTTTGGCAGCTTTTCCTTGCACTATCGCGCGCCGCGGGTAGGGCGCAATCCAAAGACCGG CCAGTCGGTCGAGCTCGAAGGCAAGTTCGTGCCGCATTTCAAGCCGGGCAAGGAACTGCGTGATCGCGTCAATGAGGACGAGCACGAGCATTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAATGAAGGAGCAGTCTGATGCGTAACCTCAAGCGCGCCCTGGCGGCGTTGTTCGTGCTGCTGCTGGCGGCTGTCGTGCTGTTCTTCGTGCTGGAGAAT CAGCAGGCCGTATCACTGGTGCTGTTTGGCTGGTCTGCGCCCGCCTTGCCGGTAGCCGTGCCGGTATTGGCTGCCCTGGTGGTAGGTCTGGCAGTGGGGC CATTGCTCGGTGCCTATGGTGTCCAGCGCAGCAAGCGCAAGATTCGCGCATCGGCGCGGCAGGCGGCATTGACCGGTAATTAAGTGGGCTCCTACAGCTC TGTAGGAAACCACGCCTGTGCACGCAGCTCATGGAATGGAGAATTAGGCCGCCATTCAGCGGCCCAAGCGAGCGTGCAAGATCATGCAATTTCCCTGTCT TACCCATCATGGTGGCACCCAAGGCGTTACGGGTTCCTGCCATCAGCTTCATCTGGACTCGGTAACCAGTCTGCTGGTCGATTGCGGCCTCGAGCAGGGC
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVELEGKFVPHFKPGKELRDRVNEDEHEHS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site