Pseudomonas aeruginosa PA21_ST175, H123_09447
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA21_ST175 contig00004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGTGTGTTGCTGGAGCGCATGGCAGGCGCGCCGCTGGCCGAGCTGATCGTCGGGGTCAAGCGCGAGGAGGGCTTCGGCCTGGCATTGGTGATCGGTGC CGGCGGGATACTCGTGGAGCTGCTGCGCGACAGTCGCAGCCTGCTCCTGCCGACCACCGACGCGGCGATCCGCGATGCCCTGCTGAGCCTGCGCAGCGCG CCGTTGCTCAGCGGCTTCCGCGGTCGCCCGGCGGTATCCATGGAGGCCCTGGTGGCGGCGATCCGCGCGGTCGCCGAATTCGCCTGCGAACATGCCGAGC GCTTGCTGGAGCTGGACGTCAACCCATTGCTGGCGGATGCCGAGGGAGCGCTGGCGGTGGATGCGTTGATCCGGCTCGCCAATGGCTGAAGGCCCGGGCG GACACGACGGCTCCCCCTCCCGCTTGTGGGAATGGGAGCAAGAGCGCTGCGGCGCGAGCGGCGACTCCGATGGTCGCCGAACTGGACGAGGATATTGCCC
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| DNA Sequence for Gene |
>H123_09447
ATGCAACCACAGAAGACCCTCACCGCCGGCCAGGCCCTGGTCCGCTTGCTGGCCAACTACGGCGTGGATACCGTTTTCGGCATCCCCGGCGTGCATACCC TGGAGCTGTACCGCGGACTTCCGGGCAGCGGCATCCGCCACGTGCTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGTTATGCGCGGGTCAG CGGCAAGCCGGGAGTGTGCTTCGTCATCACCGGGCCGGGCGTGACCAACGTCGCCACCGCCATCGGCCAGGCCTACGCCGACTCGGTGCCGCTGCTGGTG ATTTCCAGCGTCAACCACAGCGCCAGCCTGGGCAAGGGCTGGGGCTGCCTGCACGAGACCCAGGATCAGCGTGCCATGACCGCGCCGATCACTGCCTTCT CCGCCCTGGCCTTGAGCCCGGAACAGCTGCCCGAACTGATCGCCCGGGCCTACGCGGTGTTCGACAGCGAGCGTCCGCGCCCGGTGCATATCTCGATCCC GCTCGACGTGCTTGCCGCGCCGGTGGCCCATGACTGGAGCGCTGCCGTGGCGCGCCGCCCTGGTCGTGGTGTGCCGTGCACCGAGGCATTGCGGGCGGCG GCGGAGCGCCTGGCTGCGGCCCGGCGACCAATGCTCATCGCCGGCGGCGGCGCGCTGGCGGCCGGCGATGCGCTTGCCGCGCTGAGCGAGCGCCTGGCCG CGCCGCTGTTCACCAGCGTCGCCGGCAAGGGCCTGCTGCCGCCGGACGCGCCGCTCAACGCCGGGGCCAGCCTGTGCGTAGCGCCGGGCTGGGAGATGAT CGCCGAGGCCGACCTGGTGCTGGCGGTGGGCACCGAGATGGCCGACACCGACTTCTGGCGCGAACGCCTGCCGCTGTCCGGCGAACTGATCCGCGTCGAT ATCGACCCGCGCAAGTTCAACGACTTCTATCCCTCTGCCGTAGCGCTCAGGGGCGATGCCCGGCAGACCCTTGAGGCGCTGCTGGCGCGCCTGCCGCAGG AGGCCCGCGACGCCGCGCCGGCCGCCGCGAGGGTGGCGCGCCTGCGCGCGGAGATCCGCGCGGCACACGCGCCGCTGCAGGCGCTGCACCAGGCGATCCT CGACCGGATCGCCGCCGCGCTGCCGGCCGATGCTTTCGTCAGCACCGACATGACCCAACTGGCCTATACCGGCAACTACGCGTTCGCCAGCCGAGCGCCG CGCAGCTGGCTGCATCCCACCGGCTACGGCACCCTCGGCTACGGCCTGCCGGCCGGCATCGGCGCCAAGCTCGGCGCCCCGCAGCGCCCGGGCCTGGTGC TGGTCGGCGATGGCGGCTTCCTCTACACCGCGCAGGAACTGGCCACCGCCAGCGAGGAACTGGACAGTCCGCTGGTGGTGCTACTGTGGAACAACGACGC GCTCGGCCAGATCCGCGACGACATGCTCGGCCTGGACATCGAGCCGGTCGGCGTGCTGCCGCGCAACCCCGACTTCGCCCTGCTGGGCCGCGCCTACGGT TGCGCGGTGCGCCAGCCGCAGGACCTGGACGAACTGGAGCGCGACCTGCGCGCCGGCTTCGGGCAGCCCGGCGTGACCCTGATCGAACTGCGGCACGCCT GCGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCCGGACAAGGAGAGCATCCATGCGCTATTCCGACTTCACTCAACGTATCGCCGGCGACGGCGCCGCTGCCTGGGACATCCACTATCGCGCGCTGGCG CGGGTCGAGCAGGGCGAGGAAATCCTCCTGCTGTCGGTCGGCGACCCCGACTTCGATACCCCGGCGCCCATCGTCCAGGCGGCCATCGACAGCCTGCTGG CCGGCAATACCCACTACGCCGACGTGCGCGGCAAGCGCGCCCTGCGCCAGCGCATCGCCGAGCGCCACCGGCGGCGCAGCGGCCAGGCGGTGGACGCGGA GCAGGTGGTGGTGCTGGCAGGTGCCCAATGCGCGCTGTACGCGGTGGTGCAGTGCCTGCTGAATCCGGGCGACGAGGTGATAGTCGCCGAGCCGATGTAC GTCACCTACGAAGCGGTGTTCGGCGCCTGTGGCGCGCGGGTGGTGCCGGTGCCGGTGCGCTCCGAGAATGGCTTCCGCGTGCAGGCCGAGGAGGTCGCCG
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| Amino Acid Sequence |
>decarboxylase
MQPQKTLTAGQALVRLLANYGVDTVFGIPGVHTLELYRGLPGSGIRHVLTRHEQGAGFMADGYARVSGKPGVCFVITGPGVTNVATAIGQAYADSVPLLV ISSVNHSASLGKGWGCLHETQDQRAMTAPITAFSALALSPEQLPELIARAYAVFDSERPRPVHISIPLDVLAAPVAHDWSAAVARRPGRGVPCTEALRAA AERLAAARRPMLIAGGGALAAGDALAALSERLAAPLFTSVAGKGLLPPDAPLNAGASLCVAPGWEMIAEADLVLAVGTEMADTDFWRERLPLSGELIRVD IDPRKFNDFYPSAVALRGDARQTLEALLARLPQEARDAAPAAARVARLRAEIRAAHAPLQALHQAILDRIAAALPADAFVSTDMTQLAYTGNYAFASRAP RSWLHPTGYGTLGYGLPAGIGAKLGAPQRPGLVLVGDGGFLYTAQELATASEELDSPLVVLLWNNDALGQIRDDMLGLDIEPVGVLPRNPDFALLGRAYG CAVRQPQDLDELERDLRAGFGQPGVTLIELRHACAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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