Strain | Pseudomonas aeruginosa PA21_ST175 contig00002, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGAGGTGAGCTTCAGCAACCTGGGCCTGGATTCGCCGATCGCCCAGGGCCGCGACGGCACCGTGCACAAGGTGGTCTACGGCCTGATGAGCGGCGACAGC AGCGCCCTGCAGGGGCAGATCGACGCGTTGCTGAAAGCGGTCGACCCGAGCCTGTCGATCAACTCCACCTTCGACCAGTTGGCCGCGGCCGGCGTCGCCC ATGCCACCCCGGCTGCGGCAGCGGCGGAAATCGGCGTGGTCGGCGTGCAGGAACTGCCGCACGACCTGGCCCTGGCGGCCTGAGCAACTGTCCACGATAG CGTTCGTGGACTGCTTGCGCTAAAGGCCGGAGAGGAGTTGGCGCTCCTCTCCGGCGCGCGAACCGCCGTCGCTGCGCCTCGCACCCGTGGCGACGGCGGC CCCCGGATTGTTCCTCCGCCGGCCGTGCCCGGCAAGCGGAGACTGCCGCAATGTCCTCCGGGCCCGCTCGCGGCCCGGACACCCAGAGGACCCGACTCCG
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DNA Sequence for Gene |
>H123_05451
ATGAAGCTCCGGCCGGCCTCGCCGCGCAATGAAATCCTCGCCACCCTCGGCCGCTTCCGCCCGGCGCTGCGCAGCGTCGCGCTGTTCACCGCGGTGATCA ACCTGCTGATGCTGGCGCCGTCGCTGTACATGCTGCAGGTCTACGACCGGGTGCTCGGGTCCGGCAACCACATGACCCTGCTGATGCTGACCCTCATGGT GCTCGGCCTCTACCTGCTGCTCGGCGCCCTGGAGTGGGTGCGCAGCCTGGTGGTGATCCGCCTTGGCGGCCAGCTCGACATGCAACTCAACCAGCGCATC TACGACGCCTCGTTCCGCGCCAGCCTGGAGCGCGGCGAGCAGGCCGTCGGGCAGGCGCTGAACGACCTGGCCAGCCTGCGCCAGTTCCTCACCGGCAACG CCCTGTTCGCCTTCTTCGACGCGCCCTGGTTCCCGCTCTACCTGCTGGTGATCTTCCTCTTCAGTCCCTGGCTCGGCCTGCTCGCCCTGGTTGGGGCGCT GCTGCTGGTGCTGCTCGCCTGGGTCAACGAAAGCCGCTCGCGCGAACCGCTGGCCGAGGCCGGGCAACTGTCGATCCTCGCCACCCAGCAGGCCTCGGCC AACCTGCGCCAGGCGGAAACCCTGGCGGCAATGGGCATGTTGCCGGCCATGCGCGCGCGCTGGTTCGCCCAGCACCAGGCCTTCCTTGCCCGGCAGAACC TCGGCAGCGAGCGCAGCGCGGCGATCGGCGCGACCTCCAAGGGCGTGCGCCTGGCCCTGCAGTCGCTGGTGCTCGGCCTCGGCGCCTGGCTGGCGGTGGA AGGCCTGATCACCCCGGGGATGATGATCGCCGGCTCGATCCTGATGGGCCGCGTGCTCAGCCCCATCGACCAGTTGATCGCGGTCTGGCGCCAGTGGAGC GGCGCGCGGCAGGCCTACCAGCGACTGGCGCGGCTGCTCGAGGAGAATCCGCCGGCCGCCCTAGGCATGCCGCTACCGGCGCCGCGCGGCGCGTTGCGCG TCGAGCGGCTCTGCGCGGCCGCGCCGGGACGCGAGCAGGCATTGTTGCAGGACCTCGGTTTCGCCCTGGAGCCTGGCGAAGCGCTCGGCGTGATCGGGCC GTCCGGTTCCGGCAAGTCGACCCTGGCACGCTTGCTGGTGGGCGCCTGGCAGCCGCTGTCCGGCGCGGTGCGCCTGGACGGCGCCGACCTGCGGCAGTGG AGTGCGGCGGCACTGGGGCCGCACATCGGCTACCTGGCCCAGGACGTGCAACTGTTCGCCGGTAGCATCGCCGAGAACATCGCGCGCTTCGCCGAGGTGG ATGCCGAGAAGGTGGTGGCGGCGGCGCGCCTGGCCGGCGTGCACGACCTGGTGCTGCGCCTGCCGCAGGGCTACGACACGCGCCTTGGCGACGGCGGCGC CGGACTCTCCGGCGGCCAGCGCCAGCGCATCGGCCTGGCCCGCGCGCTGTACGGCCGACCGGCGCTGATCGTGCTCGACGAACCCAATGCCAGCCTCGAC GAGGCGGGTGAGGCGGCCCTGGCCGAGGCCATCGCGGCGATGCGCCGGCACGGCAGCAGCCTGGTGCTGGTCACCCACAAGCCGGCGGTGCTGGCGCTGA CCGACAAGCTGTTGTTGCTGCATGGCGGGCGCCTGCAGCGTTTCGGCGCGACCGCCGAGGTGCTTGCCAGCGCCTCGCCGCCGGCCGCTGCGGCCCCGGC GCCGACACGGCCGACGCCGGCGTTCGGTTTCGGCTACCGGCCGGGACCGGGGATGCCGGTCGGCGGTGTGCCGGGAGGAGCGGCGCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGGCAGGCGCGGTTGCGCGAAGTCGGCGCCGGCGGCGCGGCGCTGGAACTGGACGAGAAGCGTTTTTCCCGGCTCGGCTGGGGGCTGGTGCTGCTCGG CTTCGTCGGCTTTCTCCTGTGGGCCGGGTTGGCCCCGCTGGACAAGGGTGTCGGGGTCTCCGGCACGGTGATGGTGGCCGGTAGCCGCAAGGCCGTGCAG CACCCTACCGGCGGCCTGGTCAGGCACATCCGCGTGCACGAAGGCGAGCGGGTTGAGGCAGGACAGGTGCTGCTGGAGATGGACGCTACCCAGGCCCGGG CCCAGGCCGATGGCCTGTTCGCCCAGTACCTGGCGGCGCTGGCGAGTCTGGCGCGGCTGAGCGCCGAGCGCGATGAAAAGGCGCGGATCGAGTTTCCCGC CGAGCTGCTGGCGCTGGACGACCCGCGCCTGCCGACCTTGCTGGAACAGCAGCGGCAGTTGCACGACAGCCGTCGGCGGGCGCTGCGCCTGGAACTCGAT
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Amino Acid Sequence |
>peptidase
MKLRPASPRNEILATLGRFRPALRSVALFTAVINLLMLAPSLYMLQVYDRVLGSGNHMTLLMLTLMVLGLYLLLGALEWVRSLVVIRLGGQLDMQLNQRI YDASFRASLERGEQAVGQALNDLASLRQFLTGNALFAFFDAPWFPLYLLVIFLFSPWLGLLALVGALLLVLLAWVNESRSREPLAEAGQLSILATQQASA NLRQAETLAAMGMLPAMRARWFAQHQAFLARQNLGSERSAAIGATSKGVRLALQSLVLGLGAWLAVEGLITPGMMIAGSILMGRVLSPIDQLIAVWRQWS GARQAYQRLARLLEENPPAALGMPLPAPRGALRVERLCAAAPGREQALLQDLGFALEPGEALGVIGPSGSGKSTLARLLVGAWQPLSGAVRLDGADLRQW SAAALGPHIGYLAQDVQLFAGSIAENIARFAEVDAEKVVAAARLAGVHDLVLRLPQGYDTRLGDGGAGLSGGQRQRIGLARALYGRPALIVLDEPNASLD EAGEAALAEAIAAMRRHGSSLVLVTHKPAVLALTDKLLLLHGGRLQRFGATAEVLASASPPAAAAPAPTRPTPAFGFGYRPGPGMPVGGVPGGAAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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