Pseudomonas sp. GM25, PMI24_05808

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_179.179, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAAGCCCCGTAATCCGGGGCTTTCTCAAACTGGCACGCCGCTTGCTATAACCCTGTTACGAAAAATCCGGTCACCTGAAGGTTCCCGACATGAGCATCAG CTTCGATAAAGCGCTCGGCATTCACGAAAAGGCTCTGGGCTTCCGCGCCCAGCGTGCCGAAGTGCTGGCCAACAACATCGCCAACGCCGACACCCCGAAC TACAAGGCGCGGGATCTGGAGTTCTCCAAAGTGCTCGAAGCACAGAGCCAGAAGAACGCCAACGGCACCATCGCCCTGAACATGACCAACAGCCGTCACA TCGAAGCTGAAGGCCTGGGCAATGGCGACGAGTCGCTGATGTATCGCACGCCGATGCAGCCGTCGATCGACCAGAACACCGTGGACGCCCAACTGGAACA GTCGAACTACGCGGAAAACGCCGTCGGCTTCCAGGCCAGCTTCACCCTGCTCAACAGCAAATTCAAAGGGCTGGTCTCAGCCCTGCGCGGAGAGTAATCC
DNA Sequence for Gene
>PMI24_05808
ATGTCCCTGTCCAGCGTTTTCAACATTGCCGGCAGCGGCATGAGCGCCCAGACCACCCGTCTCAACACCGTGGCTTCGAACATCGCCAACGCCGAGACCG TCTCGTCGAGCATCGACCAGACCTACCGTGCCCGTCACCCGGTGTTCGCCACCATGTTCCAGGGCGGCCAGAGCGGCGGCAGCAATTCGCTGTTCCAGAA CCAGGACGCGGCCGGCCAGGGCGTGCAGGTCATGGGCGTGGTCGAAGACCAGAGCAACCTCGAAGCGCGCTACGAGCCGAACCATCCGGCAGCCGACGCC AAGGGCTACGTCTACTACCCGAACGTCAACGTGGTTGAAGAAATGGCTGACATGATTTCCGCGAGCCGGTCGTTCCAGACCAACGCCGAAATGATGAACA CCGCCAAAACCATGATGCAGAAGGTACTGACCCTCGGTCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGGGCGACTGCCATGAGTGTTACCGATACCACCAGCAGCCTGACGATGAACGACATACTGGCCAACTCTTCGAAGAAGACCAGTAGCACGACCACCG GCGGCATCGCTTCGGCCACCAACAGCTCGACCGGCGGCCAGGCCCTGGGCAAGGACGCGTTCCTGCAACTGCTGGTCACCCAGCTGAAAAACCAGAACCC GCTCGACCCGCAGGACAACAGCGCATTCGTTGCCCAGCTGGCGCAGTTCAGCAGCCTTGAGGGGATTACCACCCTCAACAGCACCGTCAGCTCGCTGGCC GGCAACTACAACTCGTCGCAAGCCCTGCAGGCTTCGTCGCTGGTCGGCCGCAACGTGATCGTGCAGACCAACACGGTTCAGCTGGACGACCCGAGCAAAG GCATGACCGGTTCGGTCACTGTTCCTTCATCGATTGCCGGCGGCACCGTCTCCATCACCGACAGCAGCGGCACCGTTGTTCGCACCATCGATCTGGGCAG
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGGSNSLFQNQDAAGQGVQVMGVVEDQSNLEARYEPNHPAADA KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site