Pseudomonas sp. GM25, PMI24_05465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_170.170, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGACGTGCTGCTTAACGGTTAAACATCGATCCACAGCCCTTGCGCGTCTTCACGGCAAGGGATGGCCGTCAGCGATTGCCCGGCGCACGGGCCGGCGA CGCATTCACCGTCCTCGATCAGAAACAGTGCGCCGTGGGTTGCGCACTGGATCAGGCTGTTGCTCGGGTCGAGAAACTGGTCGGGGTGCCATTCCAGGCC AACGCCCCGATGCGGGCAGCGGTTGAGGTAGACATACGCCCGCCCCGCGCGGCGCACGGCAAACAGTTTTTTCCCGTCGATATCGAAACCGCGACTGCCG TCCTCAACCAGATCGGTACCCGCGCAAAGAAACTTCATGGCTATCCTCAAATGTCGGCTCGTGTCTGGATATGTCCGAGCTTGACGTTCAAATGCAAACA ATTATCAAATGGCCGCCTTCACCCGTGGCGAGGTGACCGCTGCCGAGGATACTTGGCCTGCCGTCCCGATGCCCGGGAAAACCTTTCAAGGAAGCTGTCT
DNA Sequence for Gene
>PMI24_05465
ATGCGCCTGAGTACCCGCGTTGCCGTGTTGTGTGTCGGACTTTTGGTCAGTCACCAGGCTGCAGCGGCCGAGTTGCCGCAACGTTGGGTCAGCGCTGGCG GCGCGTTGTCGGAGTGGGTGAGTGCGCTGGGTGGTGAGGCGAGACTGGTGGGCGTCGATACAACCAGCCAGCATCCGCAGTCCCTCAAGTCGTTGCCGAG CATCGGCTATCAGCGCAGCCTGTCGGCCGAAGGCATTCTCAGCCTGCGTCCGGACATCCTGATCGGCACCGAAGAAATGGGCCCGCCGCCAGTGATCTCG CAGGTTCGCAGTGCCAAGGTGCAGGTGGAATTGTTTTCGGCTCAGCCGGATCTGCCGACACTGGAAAAAAATGTCACTCATCTGGGGCAGTTGCTGGGTG CCGAAAGCCAGGCCGCGCAATTGCTGCAAAGTTATCAACAGCAGCTTGATGCGCAAAAAGCGCGAGTGGTTGAAGCTCAGACCCAGCAGAAAGCGCCGGG GGTGTTGTTGCTGCTCGGGCATGCCGGCGGCAAACCGCTGATCGCCGGCAAAGACACCGCCGCCGACTGGCTGCTGCAGCAGGCGGGCGGGCATAACCTT GCGACCCACACCGGTTACAAACCGTTTTCCGTGGAATCCCTGGCCAGTCTCGATCCCGAAGTGCTGGTGTTCGCTGACCGTGCGCTGACCGGCGACGCGG CGAAAGCGGCGCTGTTCAAGGAAAACCCGATCCTCAATTCCAGCCGCGCGGCCAAGACCGGACGCGTGCTGGAGCTGGACCCGACGCTGCTGGTGGGCGG GCTCGGACCGCGTTTGCCGGCAGCGCTGAAGACCCTGACTGACGGTTTCTATCCGGCCAAGAGCGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACGCTGGTCAAACCCCGTGGCTTGTTTATCGGCCTGATCCTGCTGTGCCTGCTGGCGATCTGGTTGTCGCTGGCGTTGGGGCCGGTCAGTCTGCCGTT GTTCGATACCTTGCGCGCAGCACTGCGCATGATCGGTGTGCCGCTGGCGCCGGACGGGCTGGAACAGGCTGAACTGATTCTCGGGCAGATTCGTCTGCCG CGTACGTTGCTGGGGCTGGCAGTCGGCGGAGTGCTGGCGCTGTCCGGAGTGGCGATGCAGGGGCTGTTTCGCAATCCGCTGGCCGATCCGGGGTTGGTCG GCGTCTCGAGCGGCGCGGCATTGGGCGCGGCGGTGGCGATTGTCGGCGGTTCGTTTTTTGGCGGATTGCCGGAGTGGTTCGGGCCTTATCTGCTGTCGGT TTGCGCGTTTCTCGGTGGCCTTGGCGTAACGGCGTTGGTCTATCGACTAGGCCGCCGTAATGGGCAAACGAATGTGGCGACCATGTTGCTGGCGGGTATC
Amino Acid Sequence
>ABC-type hemin transport system, periplasmic component
MRLSTRVAVLCVGLLVSHQAAAAELPQRWVSAGGALSEWVSALGGEARLVGVDTTSQHPQSLKSLPSIGYQRSLSAEGILSLRPDILIGTEEMGPPPVIS QVRSAKVQVELFSAQPDLPTLEKNVTHLGQLLGAESQAAQLLQSYQQQLDAQKARVVEAQTQQKAPGVLLLLGHAGGKPLIAGKDTAADWLLQQAGGHNL ATHTGYKPFSVESLASLDPEVLVFADRALTGDAAKAALFKENPILNSSRAAKTGRVLELDPTLLVGGLGPRLPAALKTLTDGFYPAKSGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site