Pseudomonas sp. GM25, PMI24_05042
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM25 PMI24_contig_129.129, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCGTTCTGGCCTGCACGGCGTTGTACGCCGATGGCCGCCGGTCATTGGCGGGGTTCGCGGCGATTGTCCGTGAGCAGTTTTCCGTGGCAGTGGAACTG AGCGCTTATGAAGGGGCGTGGCGTGAAATCCCACGCGCCAGCCGCAGCGTCATGAAGGCCGGCGGACGCAATCTGCAACTGGGCCGCAGCGCTGTCGCCG GGACTCGGGTCTGGGATGAACATGCCGGGATTCGCCTGACGCTGGGGCCGCTGCCATCGACGCAGGCCGCGCGCTTTTTGCCTGACGGTGAGGCGCATCC GGCACTGGCGAGCCTCGCTGCGCTGTATTTCGGCCCGGATCTGGACGTGAAACTGGTGCTGCTGGTGCGCGGTGCCGGGCCACTGCAACTCGGCCGACAA ACCCCGGCCCTGTTGAGCTGGAACGGTGGCCTGCAACGTCAGACCAGCCTGGCCGTGCAACGGATCGAAACCCGCCTGCGTCAGCTGGAGATCACCTGAT
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| DNA Sequence for Gene |
>PMI24_05042
ATGGAACTGGCCAGCCTGATCGGACGCCTCAACCCGGACAACCGCCGCGCCCTCGAACGCGCTGCCCAGCGGTGCTTGCAGCGCGGGCATCACTTTGTCG AGATCGAGCATTTGTTGCTGGAACTGCTGGATATCGAGGGCGGCGATTTTGCCTTTCTGTTGCCGCGTTTTGGATTGGAACGGGATGCGCTGACGGCGGA GATCAACAAGGCGCTGGACCTGTTCAAGGCTGGCAGCACGCGCACGCCTGCGCTGTCTTCGCACACGCTCGGATTGCTGGAAGACGCGGTGGTGCAGGCC AGTGTGCTGGGGATCGACAGCATTCGTTCCGGGCTGCTTTTATTGGCGTTGATCGACCGTGACGAGCGCCGCAGCCTGCTGCTCAACAGTGCATCGTCAT TGCTGCGAATTCCGAAAGAAGCGCTGCGAGCAAACCTGCTGGAGTGGACGGAAAACTCCCGCGAGCATGTCGGCCCGCGTTCCGTGTCTTCGGGGAGTCC AACGCCACGGCAAGACTCGGTGCTCGATCAATACACCCAGGACCTGACCGCCGATGCTCACGCTGGGCGCATCGACCCGATCGTCGGTCGCGATGGCGAA ATTCGCCAGTGCATCGACATTCTTCTGAGACGCCGGCAGAACAACCCGATTCTGGTCGGTGCGCCGGGCGTAGGCAAAACCGCCGTGGTCGAAGGCCTGG CGCTGCGCATCGCCGCCGGGGATGTGCCGCCGTCGTTGCAGGAAGTCAGTTTGCGGGTGCTCGACCTTGGTTTGCTGCAGGCCGGGGCCGGGGTCAAAGG TGAATTCGAACAGCGACTCAAAGGGGTGATCGACGCGGTTCGCAGTGCCGACAAGCCGATCATCCTGTTCATCGACGAGGCCCACACCTTGATCGGCGCT GGCGGTGCCGAGGGCGGCAGCGATGCCGCCAACCTGCTGAAACCTGCACTGGCCCGAGGCGAGTTGCGCACGTTGGCCGCGACGACCTGGATGGAATACA AAAAATATTTCGAGAAAGACCCGGCCCTCGCCCGCCGTTTTCAACTGGTGCAGGTGGAAGAGCCGGACGAAATCACCGCCGTGGAAATGCTCCGGGGCGT CGCCGCCAAACTCGAACAGCACCACGGCGTGCAGGTGCTGGATGCCGCGATCCACGAAGCGGTGAAGCTCTCGCATCGCTACATTTCCGGCCGCCAGTTG CCGGACAAGGCCATCAGTGTTCTCGACACCGCCTGCGCCCGGGTCGCCCTCGGTCAGCACGATGTGCCGCCACCGCTCGAGAGCCTGCGCCACCGTCAGC AAAGCCTCAAAGAAGAAGTCGAACGCCTGCGCCGGGAACAGGCCACGGGGCTTGATCACCGCGAGCGCATCACCCTGCTGGAAAGCGAATCGAAGACCAA CGTCCAGGCCATCCGCGAACTGGAAACCCGCTGGGGCGAAGAGCGCGTGGCGGTGCGCGAACTGCTCGACACCCGCCGCGAGTTACTGGCGTTGAGCGAA AGCGCCGACAGCGACAAGCCCGACGAAGCCATCGACAGCCGCATCGATCATCTGGCCGCCGAACTGCTGCGTCTGGAAGCCGGGCTCGATGCGATCCGCC AGGACGATCCGCTGGTGCCCGAGCAGGTCGACGGCAAAACCGTCGCCGCCGTGATCGCCGGCTGGACCGGCATCCCCGTCGGCAAAATGCTCGCCGACGA AGCCCACGCCGTGCGCACGCTCGGCACACGCATGGGCCAGCGCGTGATGGGTCAGAGCACCGCGCTTAACACCATTGCCCAGCGCTTGCAGGCCTACCGC GCCGGGCTCACCGATCCGCAAAAACCGGTCGGCGTGTTCCTGCTGGTCGGCCCCACGGGCGTTGGCAAAACCGAAACCGCGTATGCGCTGGCGGACGCGC TATACGGCGGCGAACGCAATCTGATCAGCATCAATCTCTCGGAGTATCAGGAAGCCCACACCGTCAGCCAGCTCAAAGGCGCACCGCCCGGTTACGTCGG TTACGGCAGCGGCGGCGTACTGACCGAAGCCGTGCGGCGCAAACCGTATTCAGTGGTGTTGCTGGATGAAATCGAGAAGGCGCATCCGGATGTACTGGAA GCGTTTTACAACGTGTTCGACAAGGGCTTGATGGAAGACGGGACCGGGTTGGTGGTCGACTTCAAGAACACCGTGATGCTGGCCACCAGTAATGTCGGCG CCGAGTTGCTGCTCGATACACCGACTGCACAACTCGGCTCGGAAGCGTTCAACGAAGCGCTGCACAAAGCCCTGCTGCAAGCCTTCCGCCCGGCGTTTCT GGCGCGCATGACGGTGGTTGCGTATCGGCCGCTGGATGAGCAGACGCTGGAAGGGATTGTGTTGGCGAAGCTGGAGAAATTGCGCGGCCGTTACAAGGCT GCGACGGGCAAGCAGTTCGAGTTCGATTCGGGAATTGTGAAAGCGGTGCTCGCCAAATGCAGTGCGGCGGGTGCGCGGGATGTCGAGAATGTGTTGATGA CGCAGGTGACAGGGAAATTGGCGGAGTGGGTGTTGGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGACGTACTGTCATTGAAAGCTAAAAAAATACAGGAGTTAATGGAATGCCGTTACCCAGCGCGCCTCAACAGAGACCTGTTATCAACGTTTTGTCACCG CACAATCCCAACCATCTCTGCATCCTCAGTGTTGTGCTGGGTGTCATCGGGCAGCATGTCACCACCAAGAGCCCGGAAGAGGTACAGGCCTACACTCACC CTGGTGAAAGTACCATCTATGTGGCAGCGAACAAAAATGGCGAGTCATTGATTGCCGCCTGTGAGGTGCTTCTAACCGCCATACACCCCGGTGGTAGTAA TGCACTCATGGAAGCGGCCAGAATTCTCCATGTGTTGTTCTCGGAAACGGACCGAGTGATCAATCAGAACATCCCGGAATACGAGTTGCAGGAAAGCTGG CTGAAGAGCAATCAGGTTGGTAATAAAAATGGCAATTGGGCGACAGACGAAAACTCCAAACTGGTCAGATGGAAGTTTCTCGATCGCGCGCCGATCATTC
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| Amino Acid Sequence |
>ATPase
MELASLIGRLNPDNRRALERAAQRCLQRGHHFVEIEHLLLELLDIEGGDFAFLLPRFGLERDALTAEINKALDLFKAGSTRTPALSSHTLGLLEDAVVQA SVLGIDSIRSGLLLLALIDRDERRSLLLNSASSLLRIPKEALRANLLEWTENSREHVGPRSVSSGSPTPRQDSVLDQYTQDLTADAHAGRIDPIVGRDGE IRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAAGDVPPSLQEVSLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSADKPIILFIDEAHTLIGA GGAEGGSDAANLLKPALARGELRTLAATTWMEYKKYFEKDPALARRFQLVQVEEPDEITAVEMLRGVAAKLEQHHGVQVLDAAIHEAVKLSHRYISGRQL PDKAISVLDTACARVALGQHDVPPPLESLRHRQQSLKEEVERLRREQATGLDHRERITLLESESKTNVQAIRELETRWGEERVAVRELLDTRRELLALSE SADSDKPDEAIDSRIDHLAAELLRLEAGLDAIRQDDPLVPEQVDGKTVAAVIAGWTGIPVGKMLADEAHAVRTLGTRMGQRVMGQSTALNTIAQRLQAYR AGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLE AFYNVFDKGLMEDGTGLVVDFKNTVMLATSNVGAELLLDTPTAQLGSEAFNEALHKALLQAFRPAFLARMTVVAYRPLDEQTLEGIVLAKLEKLRGRYKA ATGKQFEFDSGIVKAVLAKCSAAGARDVENVLMTQVTGKLAEWVLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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