Pseudomonas sp. GM25, PMI24_04876
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM25 PMI24_contig_127.127, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTACTTGACCAGTGCTTCGACCTGCGCCAGTTGCACACCCTGGGACACGTCGCTGACCGTTTCCTTGTCCGGCCAGCGAGTGTCGGCGATGCGTTTGCGC AGATCGCTCAGTTTCGCTTCGTCCACATGGATGGTGTACGGGCGAATGGCTTGCGACGGATCGGCTGCCGGGGTCGCGGCCCAGACGCCGCTGCTGCCCG CGAGTACGGCAAGGCCGAGCACACCGCCCCTGATGGATGACGCCAGGCAATGGCGCCAGGTAAGACCGGACGAAAGCGCAACCATGATGGATCTCCTTGT AGTCATTATTCGAAAGGCATCGCCAATCGGATCAGACCACTGGACTGGCACCGGGGCGATTACACGATGGTGTCGGTCGATACCTTGGTATGACGCGCTG CCTGGCGCGCAAAATCGCGCTCGAATTCAGCAGCGGTTAACGGGCAGAATGCGGCGGGGAAACGGCCCATTTGAATGACAAAACGGAACAAGGATTGCGG
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| DNA Sequence for Gene |
>PMI24_04876
ATGCGTGGGGAAACAGCGCTCGAACGCCTGAGCGGCACGCCATCAACCACTTCGCAGTGGTGGGTGATCGGGCTGTGCATGCTGTTCAACGTGATCGACG GGCTGGACGTGATGGCCATGGCCTTCACCGCCAGCCGGGTTGCGGCGGAGTGGGCGTTGAACGGCGCGCAACTGGGCCTGTTGTTGAGCGCAAGCCTGGT CGGGATGGCGCTCGGTTCGCTGCTCGCCGCGCCCAGGGCCGACCGCTTCGGGCGCAGGCCGTTACTGCTCGCCGGCCTGCTGCTCAGTGGCCTGGGTATG TTGCTGTCGTTCTGGAGTCCGGATCATCACGTGCTGATGTTCCTGCGTCTGCTGACCGGCATCGGCACCGGGGCGGTGCTGGTGGGGGCGAACGTGCTGA CGTTCGAACACGCCAGTCCGCAGCGGCGCAATCTGGCGATCGCCCTGCAATCCCTCGCCTTTGCCATGGGCGCCAGTCTGGGCGGAGTGCTGGCACATTT GCTCAATGACTTCGCGGGCTGGCGGTTTGTCTTTCTGGGTGGTGGTTGCATCACGCTGACGGCCGCGCTGGCCGGCGTCTTCTGGCTGCGAGAGTCGCCG TCATTCCTGGCACTCAAGCACCGCGCGCCTGTCGCTCCTGCGTCGCCTGACAACGCCAGCCGACCGTTTGCGCCCGGTCAGCGGCAACAGACCACATCAC TGGCGCTGGCACTCTTTCTGCTGATGTTCTGCTTTTACTTCGTGATGAGCTGGACCCCGACTCTGCTGGTCCACAACGGTTTTACCGATCGGCAAGGCGC CCAAGTCGGAATGTTATTGGCGTTTGGCGGCATGCTCGGCGCCCTGCTGCTGGGACTGGCGGCCAATCGTTTCGGCTGCCGCCGATTGTTGTCGGGTTTT CTACTGCTCAACGCAGCACTGCTGCCGCTGATGGTGCCGTCCTCGCACGTGCCCGGTCTGGCGGCACTCGTGGCCGTCACCCTTGGCCTGATGCTCAATG GTGCGGTCGCCGCCCTGTATGTTCTGGCCCCGCAAGCATTCTGCACATCGGTCCGTACGACCGGCGTCGGCGTGGTGCTGGCGATGGGACGTCTGGGAGC GATCATTTCGCCGGTGGTCGCCGGTTTGCTGCTGGATGCCCGATGGACCGCACAAGAGCTGTTCACTTTCTTCGCCAGTAGTCAGCTCTTGGCGGCCCTG CTGATCTGGCGTGGCACTAGGGAACAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGCTTGCCCGTCGTGCTGCGCGACTCGATATCGCGATGGGCCTGTTGCGCGTCTTCCAGTGAATAACGCTGGCCGATAAAGCTTTTCAGTTTGCCGGT GCTGACCCACGCGAACAGTTGCCGGGACTTTTCCAGCAGCACCTCGCGGTTGCGCACGTAGTGCATGACCGAGGGATACGTCAGCTTGATGCTGCGCGGC ACGCTGAAGATATCGATCGGCGGGATCGGGTTCATGAACGGCCCGTACAAGGCCAGGGTGCCGAAATAATCCAGCAGCTCCAGCGAGTCGGCGAAGCCTT CCGCGCCCGTGCCGTCGTACACCGCATTCACCCGCTGCCCGTCGGTCAGGCGCATGACCTGTCCGGCAATGTTGTGCGCCCGCCCGATCACCACATAGTC AGCCCCGGCCGCGAGCACCGCCTCCACCTTGTCGGCGTGAGACACCCGGCCAATGACCCTGCCGCCCCGCAGTTTGATCAACTGGGTCAGCATCAGCCCC
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| Amino Acid Sequence |
>MFS transporter
MRGETALERLSGTPSTTSQWWVIGLCMLFNVIDGLDVMAMAFTASRVAAEWALNGAQLGLLLSASLVGMALGSLLAAPRADRFGRRPLLLAGLLLSGLGM LLSFWSPDHHVLMFLRLLTGIGTGAVLVGANVLTFEHASPQRRNLAIALQSLAFAMGASLGGVLAHLLNDFAGWRFVFLGGGCITLTAALAGVFWLRESP SFLALKHRAPVAPASPDNASRPFAPGQRQQTTSLALALFLLMFCFYFVMSWTPTLLVHNGFTDRQGAQVGMLLAFGGMLGALLLGLAANRFGCRRLLSGF LLLNAALLPLMVPSSHVPGLAALVAVTLGLMLNGAVAALYVLAPQAFCTSVRTTGVGVVLAMGRLGAIISPVVAGLLLDARWTAQELFTFFASSQLLAAL LIWRGTREQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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