Pseudomonas sp. GM25, PMI24_04870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_127.127, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACCGCGATCAGTTCAAGCGCCCACTCAAGTTGTCGCAGGTGATCGAAGAAGCGCTGGGCGAGGACTCGGATTACATCGGTGTGTTCATTCCCGGCGGGC ACGGTGCGTTGATCGGCCTGCCGGAAAGCGAGGACGTGAAGAAGGTCCTGCAATGGGCCGTCGCCAAGGACAAATTCGTCATTACCCTGTGCCACGGCCC GGCGGCGCTGCTGGCGGCTGGCCTCGGTGAAACAAAGGAGTCGTGCATCTTCAACGGCTACCGGATCTGCGCGTTTCCCGATGCGCTGGACGCTACAACC CCTGACATCGGTTACATGCCCGGCCACCTGACCTGGAAGTTCGGCGAGCAGTTGCAGGCGCTCGGAGTGGAAATCACCAACCAGGGTATTTCCGGGGCGA CGCTTCAGGATCGCAAACTGTTGACCGGTGACAGTCCGCTGGCGGGCAATGCGCTGGGCAAACTGGCGGCGGCCGCGCTCCTGAAAGAGGTCACGTCGGG
DNA Sequence for Gene
>PMI24_04870
GTGAGCCCCGCACCTGCCGATGCACTCTTGCGCGCCGCCCTCGACATCGAGGCGGCGCCCACGCTGGTGGCGATCCAGAAGGCCGTCCGCAGTTTCGCCG GGGCCTATGGTTACGATCGATTCGTTCTGTTCTCCGCCACCTCGGCGTCGGAGGACGTGGTCGAGCGCATTTACTGGGTGGAAGGCGACTGGTTTGGCGA CGGCATCGCTGTCGACGCCCAGACCTACGTTCAGCGCTGCCCCGTGACTCGCCACCTGCTGGACACCCGCGAATCGTTTTTCTGGAGCAAGGTGCAGGAG GAGAGCGGCGAACTGTATCGGGTGGTTCGCTTGCCAAGCGGCCCGGGCGTGCATGGCTTGCAGATTCCAGTCTTCGGCCCGCAGGGGCTTGAAGGCGCCA TGAGCCTGGGTGGCGAGCAGATCGATGCGTCGGCGCGGGTTCGTCTGGCGCTGGGCATGCTCGCTAGCGTGGCGTTTTACTCTGCACGGCGCTTGCTCGA AGCGCCGCGGGACGAGACGGCCGGAAAACTCTCGACCCGCGAGCGCGAAGTGCTGGCGTGGGTCGCTGCCGGTCGCCGGCAGGCCGACATCGCTGCCACC CTCGGTCTGTCCGGGCGCACGGTGGAAAATCACCTGCGTTCGGCCCGTCGGCATCTGGGCGTGGCAACCACCGCCCAGGCCATCAAGATTGCCATTCGCA AGGGTGAAATAAAGGGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTTCTCACTCTGCCGGTCCCGTGCTTGAACGGCGGTGCAAAACTTCTATGATGCAAAGGGCCTGCGCCGGCTGTCTGTAACCGGTGCCGCCCCCTACGT TTTTTAGAGAGATCGATCCTCGTGGAGTCTTTTCCGGACGCATTGCACGAATCCCTCACGACCCAATTCATTTTCGGTCCTTTCTGCGTCGTTCCAGGCA AACGGCTGCTGACCCGCAACGGGGTGGCGGTCGAGATCGGCGGGCGGGCGCTGGACCTGTTGATCGCCTTGCTTGAGCAACCGGGACGGGTGCTGTCCAA GTACGACCTGATCGACAAGGTGTGGCCCGACAGCGTGGTGGCCGAAGGCAGCCTGCGCTTTCATATGACTGGGCTGCGGCGGATTCTCGGCGATGGTGAG GAGCAGGCGCGTTACATCGCGACCCAGGTGGGCGTGGGTTATGCCTTTGTTGCGCCGCTGGAAAGAAAACAGACCGCTGTTCAACCGGCGCCCATCGTGA
Amino Acid Sequence
>LuxR family transcriptional regulator
MSPAPADALLRAALDIEAAPTLVAIQKAVRSFAGAYGYDRFVLFSATSASEDVVERIYWVEGDWFGDGIAVDAQTYVQRCPVTRHLLDTRESFFWSKVQE ESGELYRVVRLPSGPGVHGLQIPVFGPQGLEGAMSLGGEQIDASARVRLALGMLASVAFYSARRLLEAPRDETAGKLSTREREVLAWVAAGRRQADIAAT LGLSGRTVENHLRSARRHLGVATTAQAIKIAIRKGEIKG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site