Pseudomonas sp. GM25, PMI24_04295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_77.77, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCGCTGCGAACCAAAGCTCCACTGGCTTGAGTGTTTCGAACTACGGCACTCAAACCTACAAAAAAGACACCCTCACTGGCACTGTCAGCGCTGTCGGCG CGTTCGTGGCCGCAGGTACTGCAACCACCAAAGATGACGATCACGGTCACGGCGGTGGCGGCGGCTATGGCAACAACGACCGGGGCCATGGCGGTAACGG CGGCGGCAAAGATCAGAAATCTGACTTCGTAGCCGTGGGTGTATTCGGTCTGGCTGGCGTGACCACTCAACAAGTGCTGACCCCAGACGGCTGGAAAAAC CCAGTTACCAACACTGCTAACGTCAGCAACGTAGGTAACAACTTCAACGGCAACGCTGGCTTCAACAACTCTGCCGGTATCGGTAACCAACAAAGCAACT CGCTGTCCATCGCTGCAGGTTGCAAAGCCTGCCTGTAATCGCGATCGAAACGAAAGCCCCGGAAACGGGGCTTTTCCTCAGTCCCAAAGGCGTATCGATC
DNA Sequence for Gene
>PMI24_04295
ATGCGTAAGACTGCCCTCCTCGCTCTGCTTTGCTTCTGCGGCCTGACCCAGGCTGCCCAGATGCCCGTTGCCGCCCTGCCTGGCGGCACGCTCGTCTACA AGAACGTGCAAAGCATTCGTGAGCGCAAGTTTGCCGACATCGTCGAACAGAAAACCGACTTCAGCTGCGGCGCCGCCGCACTGGCGACGGTATTGCGCCA GGCCTATTGGCTCGACGTCGATGAGGAGCACATCATCAAAGGCATGCTGGTCAACGCTGACCAGGACCTTGTTCGTACTCAGGGTTTTTCCATGCTGGAC ATGAAGCGCTACATAGAAAGCATCGGCATGCGCGCCAGGGGCTACAAGATTCCGCCGGAAAAGCTCGACGCAGTCACGATCCCGGTGGTGGTACTGATGG AAATTCGCGGCTACAAGCATTTCGTGGTGATGCAGCGTGCGGACAAGGATTGGGTTTACATCGGAGACCCGGTTTTAGGACACAAACGCTACTCCCATGA TGACTTTGTCAAAGGTTGGAACGGCATTGTCTTTGCCATCGTCGGCCCCGGATATGACAAGGCCAATGCCTTGCGCAGCCCTCCGGTACCGGTGACGGCC AAAAACAAGCTGGATGCCTTCAACCCGGTCAAAGATGCTGAATTGATGGACTTCGGGTTCATACAGAGCGACTTCTTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCCGATTACAAGAGTGGGGCTGGATGTCCCGGGAGCAGCAGATGAAAACCTCATACTGGCTGGCCGCCGCCTGCCTGGCAGCGAGCGCGTCAGGCTAT GCCAATGCAGGATTCAAACCCATCGAAATCAAGGACCAGGAGCTCGCAGAGCTACGCGGTCGCTACGTCATGCCGGGCCGGATCATCAGCTTCGGTGTCG TCATGAGCAGTACCTGGCGCAACGCCAGTGGAGATCTGATCGGGGCCTCGGCCACGATGCAATTGCAGGCAGCTTCGGTAAAACCTGAATTCTACGTCTC GACCATCAAGGAACACGGCAATGGCAGTACCCCGGAACTGGGGACTGGCTCGGTCGTGGGTGGCGCGGGACTCAACTCAAGCCAGGGCGTGACGCAGAGT GTGCGCGCCGCTGGCGACGGCAACTCCGCCTATAACAACGTTGCGATCAACGTCAAAGAAGCCAGTCAGGCACCTGCCCTGATGCCCGCCCAGGGCCAGG
Amino Acid Sequence
>peptidase C39
MRKTALLALLCFCGLTQAAQMPVAALPGGTLVYKNVQSIRERKFADIVEQKTDFSCGAAALATVLRQAYWLDVDEEHIIKGMLVNADQDLVRTQGFSMLD MKRYIESIGMRARGYKIPPEKLDAVTIPVVVLMEIRGYKHFVVMQRADKDWVYIGDPVLGHKRYSHDDFVKGWNGIVFAIVGPGYDKANALRSPPVPVTA KNKLDAFNPVKDAELMDFGFIQSDFF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site