Pseudomonas sp. GM25, PMI24_03800
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM25 PMI24_contig_73.73, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATAGTCGATTGATCCATTCACGCAGATTGATCGGACTTGTCTGAAGCTTAGTCGGTGGTTGGCGCGGGTGAAAAAATTGTGAAGGAGGGACCCTGAACAA ATCTGCAAATCCGGCTGTAACCCTCCGACTAGTGATCGCAAGCCTGAAAGGGCCGGAACAGAGAGGTCATGAGGCTGCTGTGACTTTGGTCGCGGCATGA CGTTGCACCATTGCTGTGCAATACTCGCCGCCCATTTGCGCGGTGAATAATCCTCGAAATGCAGGATGGTTTGTCTCGTAAACCTTGTATTTGGCGAGGT TTACGTCTGAATCAGATGTCTTATAGAGTGAAAAAACCTGTCGCAAGCTTTTTATACTGCATGCCCCGCTGATCCCGCAGGTTACTTCTGCGGGACGATC CTGCCCACGAAGCAGGGCCGGTTTTACCCAGGCGCAGGCTTATCGGCCGACGCTTGAACACTCGGTGGCCACATCCAATAACAAGACGAGGAAGTCCCCC
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| DNA Sequence for Gene |
>PMI24_03800
ATGCCAGTCGGCAATCACCCGCCCCATGGCGAAACCGCTCAAGGCGGCCCGCTCAAACGCGAACTTGGTGAACGGCATATTCGCCTGATGGCGCTCGGCG CCTGCATCGGTGTCGGTCTGTTTCTCGGTTCGGCCAAGGCCATCGAAATGGCCGGCCCGGCGATCATGCTGTCTTACATCATCGGCGGTCTGGCGATCCT GGTGATCATGCGCGCCCTCGGCGAAATGGCCGTACACAACCCGGTTGCCGGCTCCTTCAGCCGTTACGCACAGGATTACCTCGGCCCGCTGGCGGGCTTT CTGACCGGCTGGAACTACTGGTTCCTGTGGCTGGTGACCTGCGTCGCCGAAATCACCGCGGTGGCGGTGTACATGGGCATCTGGTTCCCCGATGTCCCGC GCTGGATCTGGGCGCTGGCGGCGCTGGTCAGCATGGGCTCGATCAACCTGATCGCGGTGAAGGCCTTCGGTGAATTCGAGTTCTGGTTCGCCCTGATCAA GATCGTCACCATCATCGCCATGGTGCTCGGCGGCATCGGCATCATCGCCTTCGGTTTCGGCAACGACGGTGTGGCGCTGGGGATTTCCAATCTGTGGGCC CACGGCGGCTTCATGCCCAACGGCGTGACGGGCGTGCTGATGTCCCTGCAAATGGTGATGTTCGCCTACCTCGGCGTGGAAATGATCGGCCTGACCGCCG GTGAAGCGAAGAACCCGCAGAAGACCATCCCGAATGCGATCGGCTCGGTGTTCTGGCGGATCCTGCTGTTCTACGTCGGCGCGCTGTTCGTGATCCTGTC GATCTACCCGTGGAATGAAATCGGCACCCAGGGCAGCCCGTTCGTGATGACCTTTGAACGTCTGGGCATCAAGACCGCCGCCGGCATCATCAACTTCGTG GTGATCACCGCGGCGCTGTCGTCGTGCAACGGTGGCATCTTCAGCACCGGGCGCATGCTTTACAGCCTGGCGCAGAACGGCCAGGCGCCGGCCGGTTTCG CTCGCACGTCGAGCAACGGCGTACCGCGTCGCGCATTGCTGCTGTCGATCTTCGCGCTGCTGCTGGGCGTGCTGCTCAACTATCTGGTGCCGGAAAAAGT CTTCGTCTGGGTGACCTCGATTGCCACCTTCGGCGCGATCTGGACCTGGGTGATGATCCTGCTGGCCCAGCTGAAATTCCGCAAAGGCCTGAGCGCCAGC GAACGGGCCGGCCTGAAGTACAAGATGTGGCTGTTCCCGGTCAGCTCGTATCTGGCGTTGGCGTTCCTGGTGCTGGTGGTCGGCCTGATGGCGTACTTCC CGGACACTCGCGTGGCTCTTTATGTAGGCCCGGCGTTCCTGGTGCTGCTGACCGTGTTGTTCTACGTGTTCAAGCTGCAACCGAACGATGCGTCCCAGGG CGCGGTGCGTTCGGCTTCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCGTTGTTGCTGAAACTCGAAAGCCCCGGTCGAAAGTCCGGGGCTTTTTCGTGGGTGCGAGGTTGATGCCGCTGGTCTGAAAGCGCCGCAAAAAACGAC TTCTGATTCAGAGTCATGTTCGAAGGTTTATCTACGTTGTTTCCAGCGCAGCCGTGAACAGAGGCGCAGGTATGAGGATGAGCGATTTTCTCGTAAGAGA ACTCGGCCGCCGTCAGGTCGTGCTGTTCTTCCTGCTCGCCACGCTGCTGTACATCCTGCCGCTGATCCTCGCCGACTTCCCCTACATCGACGACAACTGG CGCACGCTGGCCGCCGGCAACGCCTGGGCCGGGCAGGGGCGGTTGTTCATGGACTGGTTGTATCAGGCGCTGACGTTCACCGGCGCTGCGCCGAATATTT TTCCTCTGCCGCTGTTGCTCGCCACTGTAGCGATGTCGTTCGCTCTGACCCGGCTGACCTTCCACTATTTTCCCGAACCGACGCTGGCCTGTTGTCTGGT
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| Amino Acid Sequence |
>alanine glycine permease
MPVGNHPPHGETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGF LTGWNYWFLWLVTCVAEITAVAVYMGIWFPDVPRWIWALAALVSMGSINLIAVKAFGEFEFWFALIKIVTIIAMVLGGIGIIAFGFGNDGVALGISNLWA HGGFMPNGVTGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPNAIGSVFWRILLFYVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFV VITAALSSCNGGIFSTGRMLYSLAQNGQAPAGFARTSSNGVPRRALLLSIFALLLGVLLNYLVPEKVFVWVTSIATFGAIWTWVMILLAQLKFRKGLSAS ERAGLKYKMWLFPVSSYLALAFLVLVVGLMAYFPDTRVALYVGPAFLVLLTVLFYVFKLQPNDASQGAVRSAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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