Pseudomonas sp. GM25, PMI24_03611
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM25 PMI24_contig_69.69, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCCTGATGCTCACCGCGCGCAACGATGAAACCGACCGCATCCTCGGTCTGGAAATGGGCGCCGACGACTACCTGACCAAACCGTTCGCCGCCCGCGAAT TGCTGGCGCGGATCAACGCCGTGCTGCGGCGCACACGGATGCTGCCGCCGAATCTGGTGGTCACCGAAAGCGGCCGGCTGCTGGCGTTCGGTCGCTGGCA GCTCGACACGTCGGCCCGGCATCTGCTGGACAAGGACGGCACCATGGTCGCGCTGAGTGGCGCGGAATACCGTTTGCTGCGGGTGTTCCTCGACCATCCG CAACGTGTGTTGAGCCGCGATCAATTGCTCAACCTGACCCAGGGCCGCGATGCCGATCTGTTCGACCGTTCCATCGATCTGCTGGTCAGCCGTCTGCGCC AGCGCCTGCTGGATGACGCCCGCGAACCGGCCTATATCAAGACCGTGCGCAGCGAAGGTTATGTGTTCTCGCTGCCGGTCGAAGTCCTCGGAGCCCCCGC
|
|
| DNA Sequence for Gene |
>PMI24_03611
ATGAATGTCGCCCTGCGCTGGCCGCGCACCCTCGCCTCACGGTTGTCGCTGATTTTCCTGATCGGCCTGATCCTCGCTCAGGCGCTGTCGTTCGGTGCGC AATATTACGAGCGCTACGAAAGCGCGAAAAACACCATGCTCGGCAACCTCGAAACCGACGTCTCGACCTCGATTGCCATCCTCGACCGCCTGCCCGCCGA AGAGCGCCCGATGTGGCTCAAGCGCCTGGCGCGCAACAATTACGGTTACCTGCTGAGCGAAGGCGAACCGGGTACGCCGATCGGTCCGGGTGAAGTGCCG ATTGCGGTGACCTCGATCACCGATGCGATCGGCGAAGCGTACCCGCTGACTTTCACCGACATTCCCGGCCCGAAAAAACACTTTCAGGGCCACCTGCGCC TGAGCGACGGCAGCCCGGTGACCATCGATGTGCGTCCGTCGATGGTGCCGCTGTCGCCATGGCTGCCGGTGGTGTTGCTCGGGCAACTGGCGCTGATGCT CGCCTGCACCTGGCTGGCGGTGCGCATCGCCATCCGCCCCCTCACCCGCCTCGCCAACGCGGTGGAAACCCTCGACCCCAACGCCCACCCGATCAACCTC GACGAAAAAGGCCCGAACGAAGTGGCCTACGCCGCCCGCGCCTTCAACTCGATGCAGGCGCGCATCGCCGCGTACCTGAAGGAGCGCATGCAACTGCTGG CAGCGATCTCCCACGACCTGCAAACCCCGATCACCCGCATGAAACTGCGGGCAGAGTTCATGGACGATTCGGCCGAGAAAGACAAACTGTGGAACGACCT CGGCGAAATGGAACATCTGGTGCGCGAGGGCGTGGCCTATGCCCGCAGCATCCACGGCTCGACCGAAGAAAGCCGGCGCACCAACCTGGATTCGTTCCTC GACAGTCTGGTGTTCGACTATCAGGACATGGGCAAGGAAGTGCAGTTGAGTGGCAAGAGTGAAGCGGTCATCGACACCCGCCCCCACGCGTTGCGCCGGG TGCTGGTCAACCTGACCGACAACGCGCTGAAGTTCGCCGGGGCTGCCGAGTTGCTGATTCAACGGGACAAGAACGGCCTTTCGATCAAGGTCATGGATCG CGGCCCGGGCATCGCCGAAGAAGAACTGGCCCAGGTGATGGAGCCGTTCTACCGCGTGGAAAACTCGCGCAACCGCAGCACCGGCGGCACCGGGCTGGGC CTGGCGATTGCCCAGCAACTGGCGATGGCGTTGGGCGGTTCGCTGACCCTGAGCAATCGCGACGGTGGCGGGTTGTGTGCGGAGCTGAAATTGCCGCTAC AGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCAACAAAAAGCCCTGTGAGAGCCAATGCTCTCACAGGGCTTTTTGTTGTCGGTGAGATCAGTTGATGCCGATCACTCCGTCCTCATGCAGTTGCTGCA ACAACGCCAGACCGCTGTCCATGAATGACACCGTTGCCGGCAACCCCGTCTCCAATCCCAAGCCTTGCAGTTGCTCACGACCGCTCAGCAACGGGAATTC CTCGATCCGCTGCAACAACCGCCACGCCAGCGGGCTCAACTCGGAAAACTTCACACTCCAGTCCGTCGTGCGCCGTACCAACAAAAGCGTCGGCTGGGCT GGTGGCGTGGCCGGTTGATGATCCGGCCCCAGCATCTGCACCGGCCAGGTGTACGCCAACGGCCAGGCCAGTGCCGAAACCTGCAACGGCTTCTCCAGCA ACTGCGCCGGATCGCTCGCGGGCAAAGGTTCGGCGTCGGACTGCTGCAACACCATTTCCACCCATTCGTAGTGCGCCAGCTCGACTAGAAACGCCGGCCA
|
|
| Amino Acid Sequence |
>ATPase
MNVALRWPRTLASRLSLIFLIGLILAQALSFGAQYYERYESAKNTMLGNLETDVSTSIAILDRLPAEERPMWLKRLARNNYGYLLSEGEPGTPIGPGEVP IAVTSITDAIGEAYPLTFTDIPGPKKHFQGHLRLSDGSPVTIDVRPSMVPLSPWLPVVLLGQLALMLACTWLAVRIAIRPLTRLANAVETLDPNAHPINL DEKGPNEVAYAARAFNSMQARIAAYLKERMQLLAAISHDLQTPITRMKLRAEFMDDSAEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFL DSLVFDYQDMGKEVQLSGKSEAVIDTRPHALRRVLVNLTDNALKFAGAAELLIQRDKNGLSIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLG LAIAQQLAMALGGSLTLSNRDGGGLCAELKLPLQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|