Pseudomonas sp. GM25, PMI24_03574

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. GM25
GCF_000282255.1|latest
Locus Tag
PMI24_03574
Name
Replicon contig_69.69
Genomic location 149185 - 151227 (- strand)

Cross-References

RefSeq WP_007956218.1
GI 495231447
INSDC EJM26710.1
NCBI Locus Tag PMI24_03574
UniParc UPI000270580D
UniProtKB Acc J3F6Y5
UniProtKB ID J3F6Y5_9PSED
UniRef100 UniRef100_J3F6Y5
UniRef50 UniRef50_G8Q3S5
UniRef90 UniRef90_Q3KEL9

Product

Feature Type CDS
Coding Frame 1
Product Name
type IV secretion protein Rhs
Synonyms
Evidence for Translation
Charge (pH 7) -10.25
Kyte-Doolittle Hydrophobicity Value -0.525
Molecular Weight (kDa) 75.9
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000090 (3342 members)
Putative Inparalogs 2 predicted inparalogs
type VI secretion system Vgr family protein (PMI24_01395) 75.1% identity
hypothetical protein (PMI24_05139) 65.1% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMI24_03574

Human Homologs

References

No references are associated with this feature.