Pseudomonas sp. GM25, PMI24_03123

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_64.64, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGATCTCCGGGTAGCGCGCGTAAAACTCGGGCAGCGCCGGCACCAGAATCAGGTTGGCCAGAGGACTGGGCACGTCGACCCGCAAGCGTCCCTTGGGC TGCGCTGCCGCGCCAGGCAGGCTGGTTTCGGCATCGTCCATGTCCGCCAGCAACTTGATCACCCGCTCGTAATAGGCCGCGCCGTCCGCCGTGGCGTTGA CCTTGCGCGTGGTGCGGTTGAGCAACTTCACTCGCAGCCGCGCCTCCAGTTGCTGAATGAGCTGGGTCACGGTGGTCTTGCTCATGTGCAGCGTTTCGGC GGCCTTGGTGAAACTGCCCGCCTCCACCACTCGGGCGAAGGCTTGCATCGAGTCAAAACGGTCCATATCCCACCTCTGATAGCGGCTCGATTGTTTGGGA TTTGCAAACAGTGAGCGCCAAGGTTGCGCGTTTATCGCGCCGAGGCAAGTCCCTAGAGTTGCTCCATCACCGGTTTTCAACCCATTGAAGGAGACACCCC
DNA Sequence for Gene
>PMI24_03123
ATGACCCGTGCCCAGCCAAAACGCGACGTGGTTTTCCCGCCCGGACGCCATGCGCTTTACGAGCGCAACCGTTATTCGCCAGCAATTCGCTCCAACGGTT TTCTGTTTGTCTCCGGGCAAGTCGGCAGCCTTGAGGACGGCTCGCCGGAGCCGGATCTCAAGCAACAGGTGCGACGGGCCTTCACCAACCTCAACGCCAT TCTCGGCGCGGCCGGCGCCAGCTTCGATGACGTGGTGGACGTGACGGTGTTCATGGTCGACCCGCAATCGTCTTTCGAAACCATCTGGGAAGTGGTGCCG GAGTTCTGGGGCGAGGCACCGCATCCGACCATTACCGCAGTCGGCGTGACGTGGCTGTATGGCTTTCAGTTCGAGATCAAGGTGATCGCCAAACTGCCGG AATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGATATCGCGTCGATTTGCAGCACGGGCCGACAGTCTTCAGACTGTCGACCCGCATTCCTTTTGCGATCCATCGCCATGTCCGACACCTTGTTGAAGC CCAGCCTGCCCGGCATCGCCCTGCGCCGCTGGCGCGTGCTGCACCGCGTCAAGCAGAGCCATGCCGCCGAGTTGTTCAGGGTCACCCAGTCGACTATTTC CCGTTGGGAAAGCGGCGTGCAGGCGATGGACCCGGACGCCCATCTTCAGCTCGAACGGCTGCTCGCGGCGCGACTCGACAGCGCCGCCGATCAGGCCCTC GCGCGACTGGTTACGGACAGCGCGCGGCCGGTTCACCTGGTATGCGACCTGACTCATCGCCTGCTGGCCTGCTCCCCGGCTCGCGCGGCGCAGTTCAGCA GTCCGCTGAGCGATCTGCTGGGGCAATCGCTGTGGCGCTTTGCGACGGCGCAAATCCAGCACAAGGAATCCTTGCTGGATGACACCGGTTGGCGCGAAGT
Amino Acid Sequence
>endoribonuclease L-PSP
MTRAQPKRDVVFPPGRHALYERNRYSPAIRSNGFLFVSGQVGSLEDGSPEPDLKQQVRRAFTNLNAILGAAGASFDDVVDVTVFMVDPQSSFETIWEVVP EFWGEAPHPTITAVGVTWLYGFQFEIKVIAKLPE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site