Pseudomonas sp. GM25, PMI24_02416

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_61.61, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCTTTGAACAAACCTTGAGCGAACTGGTTGAGCTCGAAGGTTTGACGCTCAGCTATTACCGAGGCTGGGACAAGGACCGGGAATTGAGCGCTGTACTCG CCGGATCCGTGCAACGGGACCAGCAAATGGGTCATACCCAGGCCGGGCCACAACGGGCTGACTTGCGTCTTAGATTGGGCGCACACAACGCCGCGGACAT CCTGTCCCGGGGTCAGCAGAAGTTGGTGGTCTGTGCGTTGCGGATTGCCCAGGGGCATCTGGTGAGCCAGGCCCGACGCGGCCAGTGTATTTATCTGGTG GATGACTTGCCGTCCGAACTGGACGAGAGCCACCGTCGCGCGCTGTGCCGCCTGCTGGAAGACTTACGCTGCCAGGTTTTTATCACCTGTGTAGATCACG AATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTCTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGCA
DNA Sequence for Gene
>PMI24_02416
TTGAGCGAAGAAAATACGTACGACTCATCGAGCATTAAAGTGCTGAAAGGCCTGGATGCCGTGCGCAAACGTCCCGGTATGTACATTGGTGACACCGACG ATGGCAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCGATCGACGAAGCCCTCGCCGGCCACTGCGACGACATCAGCATCATCATCCACCC GGATGAGTCCATCACCGTTAAAGACAACGGCCGTGGTATCCCGGTAGACGTGCACAAGGAGGAAGGCGTTTCCGCCGCCGAGGTCATCATGACCGTCCTC CACGCCGGCGGTAAGTTCGACGACAACTCCTACAAGGTATCCGGCGGTCTGCACGGTGTAGGTGTTTCGGTTGTGAACGCGCTGTCCGAAGAACTGGTAC TGACCGTGCGTCGCAGCGGCAAGATCTGGGAACAGACCTACGTCCACGGTGTACCTCAGGCACCGATGGCGATCGTTGGCGACAGCGAAACCACCGGTAC CCAGATTCACTTCAAGGCTTCCAGCGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGTATTCGTGAACTGTCCTTCCTCAACTCC GGTGTCGGCATCGTCCTCAAGGACGAGCGCAGCGGCAAGGAAGAACTGTTCAAGTACGAAGGCGGACTGCGTGCGTTCGTTGAATACCTGAACACCAACA AGACTGCGGTCAACCAGGTGTTCCACTTCAACATCCAGCGTGAAGACGGCATCGGCGTGGAAATCGCCCTGCAGTGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATTCCGCAGCGCGACGGCGGCACCCACCTGGTGGGCTTCCGTTCCGCACTGACGCGTAACCTGAACAACTACATCGAGCAG GAAGGTCTGGCGAAGAAGCACAAAGTCGCCACCACCGGTGACGATGCCCGTGAAGGCCTGACCGCGATCATCTCGGTGAAGGTGCCGGATCCGAAGTTCA GCTCCCAGACCAAAGACAAGCTGGTGTCTTCCGAAGTGAAGACCGCGGTCGAACAGGAAATGGGCAAGTACTTCTCCGACTTCCTGCTGGAAAACCCGAA CGAAGCCAAACTGGTCGTCGGCAAGATGATCGACGCTGCCCGTGCCCGTGAAGCGGCGCGCAAGGCCCGTGAGATGACCCGCCGCAAAGGCGCGCTGGAC ATCGCCGGCCTGCCAGGCAAACTCGCTGACTGCCAGGAAAAAGACCCGGCGCTGTCCGAACTGTACCTCGTGGAAGGTGACTCCGCGGGCGGCTCTGCCA AGCAGGGACGTAACCGCAAGACCCAGGCCATCCTGCCGCTGAAGGGCAAGATCCTAAACGTCGAGAAAGCACGTTTCGACAAGATGATCTCGTCCCAGGA AGTGGGCACCCTGATCACCGCGCTTGGCTGCGGTATCGGTCGCGAAGAGTACAACATCGACAAGTTGCGCTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCGCACATCCGTACCCTGTTGCTGACCTTCTTCTTCCGTCAGTTGCCGGAGCTGATCGAGCGCGGCTACATCTACATTGCCCAGCCGC CGCTGTACAAGGTCAAGAAAGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCCCTGGAAGATGCGAGCCT GCACCTGAACGAAGACGCCCCGGGCATTTCCGGTGAAGCGCTGGAACGTCTGGTGAACGACTTCCGCATGGTGATGAAGACCCTCAAGCGACTGTCGCGC CTGTACCCGCAGGAGCTGACCGAGCACTTCATCTATCTGCCGGCCGTCAGCCTGGAAATGCTCGGCGACCACGCGAAGATGCAGGATTGGCTGGCCCAGT ACGAAGTCCGTCTGCGCACCGTCGAGAAGTCGGGCTTGGTCTACAAGGCCAGCCTGCGTGAAGACCGTGAACGTGGTGTATGGCTGCCGGAGGTCGAACT GATCTCCCACGGCCTGTCGAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAGACCGTCGTCACCCTCGGTGCTCAACTGAGCACC CTGCTCGACGACGGCGCGTACATCCAGCGTGGCGAGCGCAAGAAAGCGGTCACCGAGTTCAAGGAAGCCCTGGACTGGCTGATGGCCGAAAGCACCAAGC GTCACACCATCCAGCGATACAAAGGTCTGGGCGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGACCCAAGTGTGCGCCGCATGCTGAAAGTCAC CATCGAAGACGCCATCGGCGCAGACCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAACCTCGCCGTGACTTCATCGAGAGCAATGCCCTGGCGGTG TCCAACTTGGACTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCTTTGCACGCATAACCGAAGTCATACCAAGCCCGGTGGATCTCTGATTCATCGGGTTTTTTTATGTTCGAATGCACCACTAAACCGACGGTCTTTTT CCGACAACAATGTATGCATTTGTAAGCCACCATTGATTCTATGGAGGTGTCAGTGTGAATCTCTTCCATGTCAAAGGAAGGATTCAGATCACCTCAATCC GCGGAGGATTTACCTTGAGCGAGCAGCACCGGTCTTTCGAAGACCTGAAGCACCAATCGGAAGATGGCTTTGAATTCTGCTCCGCCCGAGAGCTCGCCCC TCTGCTGGAGTACCGTGATTGGCGAAACTTCGAAAACGTCATTAGCAAAGCCGTGCAAGCCTGCGAACACAGTAATCATCGCATCACGGACCATTTTGTT GACGTCACCAAAATGGTTTTGTCGGGGTCCGGCTCCCTGCATTAAAGAGATTGAGTCCGCAGCCAAGAAATTACAGTGAACTCTTCGTTCCAGGTTTACT
Amino Acid Sequence
>DNA gyrase subunit B
MSEENTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVKDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELVLTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTQIHFKASSETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNEDAPGISGEALERLVNDFRMVMKTLKRLSR LYPQELTEHFIYLPAVSLEMLGDHAKMQDWLAQYEVRLRTVEKSGLVYKASLREDRERGVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLST LLDDGAYIQRGERKKAVTEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site