Pseudomonas sp. GM25, PMI24_02173

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_60.60, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGATGCAGGCTGACCTGGCGAAAGTCGGGATCAAGATCGACATCCGCGTGATGGAATGGGGCGAGATGCTCAAACGCGCCAAGGCCGGCGAGCACGAC ATGGTTTCGGCCGGATGGGCGGGCGACAACGGCGACCCGGATAACTTCCTGACGCCTATGCTCAGTTGCGAAGCCGCCAAGAACGGCGAAAACTACGCTC GCTGGTGTAACGAGAAATTCCAGGCCCTGCTCGACGAAGCACGGGCTAAAGTAGATCCGGCCGAACGCGCCAAACTGTATGAAGAAGCGCAAGTCATCTT CAATCAGGACCAACCGTGGATCAGCATGGCCCACACCCGCATGTTCACCGCAATGCGCAACAACGTAGAGGGTTATCACATCAGCCCTCTGACAACCAAT AACTTCGCCACCACCCAGGTGAAGTAGATAAGAAACTCCCGGCGACCCTGACCCCAGGATCGCCGGGCACGCCTAACCGGCTGATGAGGTACCACACACG
DNA Sequence for Gene
>PMI24_02173
ATGTTTAGTTTTATTGCCCGCCGACTGGGGTTATTGATCCCCACGTTTTTCGGCATCACCTTGCTGACTTTCGCGTTGATTCGCATGATTCCCGGCGACC CCGTGGAAGTGATGATGGGCGAACGTCGGGTCGACCCCGAAATGCACGCTCAGGCAATGGAACGCCTCGGTCTGAACAAACCGTTGTACGCCCAGTACCT GGACTACATCGGCAAACTGGCCCATGGCGACCTCGGCGAATCCCTGCGCACCCGTGAGAGCGTATGGACCGAGTTCACCTCCCTCTTCCCGGCGACCCTG GAACTGTCCATGGCCGCCCTGCTGTTCGCCGGTATCCTGGGCCTCCTGGCCGGGGTGATTGCGGCCCTCAAGCGAGGATCCCTGTTCGACCACGGGGTGA TGGGCATCTCCCTCGCGGGTTATTCGATGCCGATTTTCTGGTGGGGCCTGATCCTCATCATGTTCTTCTCGGTGAGCTTGGGCTGGACCCCGGTGTCCGG GCGGATCGACCTGCTCTACGACATCGAGCCGCGCACCGGTTTCATGCTGATCGACACCCTGCTGGCCGATGACATGGGCGCGTTCCTCGATGCCCTGCAC CACCTGATCCTGCCGGCCATCGTGCTGGGCACCATTCCGCTGGCGGTGATCGCGCGGATGACCCGTTCGTCGATGCTCGAAGTATTGCGTGAAGACTACA TCCGTACCGCCAAGGCCAAAGGCCTGTCGCCGTCGCGCGTGGTGTTCGTGCACGGCCTGCGCAATGCGCTGATTCCGGTACTGACCGTGGTCGGCCTGCA AGTCGGCACCCTGCTGGCCGGTGCGGTCCTGACCGAAACCATCTTCTCCTGGCCCGGCATCGGTAAATGGCTGATCGAAGCCATCGGCGCCCGGGACTAC CCGGTTGTGCAAAACGGCATCCTGTTAATCGCCTGCCTGGTGATTCTGGTCAACTTCGTGGTGGACATCCTCTACGGCTTTGCCAACCCACGCATCCGTC ATCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCAATACCCATGAGCACTCCAACTTCCTCAGTAGCCACCGCCGCCACCGCCGTGGATCAAAGTCTGCTGTACCCGTCACCGTACAAAGAGTTCTGGCA GGCCTTCGCCAAGAACAAGGGCGCCGTCGCCGGCCTGCTGTTCATGCTGCTGGTGATCTTCTGCGCGATCTTCGCGCCGTGGGTCGCCCCGCATAACCCG AGCGAGCAATACCGTGACTTCCTGCTGACGCCGCCGGCGTGGCTCGAAGGCGGGCAGATGCAATTCCTGCTCGGCACCGATGAACTGGGTCGCGACCTGC TGTCGCGGCTGATCCAGGGTTCGCGCCTGTCGCTGCTGATCGGTCTGTCGTCGGTGGTGATGTCGCTGATCCCGGGGATCCTGCTGGGTCTGTTCGCCGG TTTCTTCCCGAAAATGATCGGCCCGACCATCATGCGTCTGATGGACATCATGCTTGCCCTGCCGTCGCTGCTGCTGGCCGTGGCGATCGTCGCCATCCTC
Amino Acid Sequence
>peptide ABC transporter permease
MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYLDYIGKLAHGDLGESLRTRESVWTEFTSLFPATL ELSMAALLFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPRTGFMLIDTLLADDMGAFLDALH HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAKAKGLSPSRVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site