Pseudomonas sp. GM25, PMI24_02010
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0030170 | pyridoxal phosphate binding |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10146
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.20.20.10 | Alanine racemase | IPR029066 | PLP-binding barrel | 1 | 228 | 3.0E-87 |
| FunFam | G3DSA:3.20.20.10:FF:000004 | Pyridoxal phosphate homeostasis protein | - | - | 1 | 222 | 1.4E-101 |
| PIRSF | PIRSF004848 | YBL036c_PLPDEIII | IPR011078 | Pyridoxal phosphate homeostasis protein | 1 | 228 | 2.0E-72 |
| NCBIfam | TIGR00044 | JCVI: YggS family pyridoxal phosphate-dependent enzyme | IPR011078 | Pyridoxal phosphate homeostasis protein | 1 | 223 | 1.2E-76 |
| Pfam | PF01168 | Alanine racemase, N-terminal domain | IPR001608 | Alanine racemase, N-terminal | 15 | 223 | 1.9E-32 |
| Hamap | MF_02087 | Pyridoxal phosphate homeostasis protein. | IPR011078 | Pyridoxal phosphate homeostasis protein | 6 | 222 | 33.470318 |
| SUPERFAMILY | SSF51419 | PLP-binding barrel | IPR029066 | PLP-binding barrel | 1 | 221 | 9.03E-79 |
| PANTHER | PTHR10146 | PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN | IPR011078 | Pyridoxal phosphate homeostasis protein | 3 | 227 | 3.3E-66 |
| CDD | cd06824 | PLPDE_III_Yggs_like | - | - | 3 | 222 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.