Pseudomonas sp. GM25, PMI24_02001

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_59.59, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCTGACCGCCCTCGGCGCCCAGCAGATCATGGGCCAGGCCTACCTCCCGGCGATCAAGGACGGCGACAAGCGCATCCTGATGATCGACGGCGAGCCGG TGGATTACTGCCTGGCGCGGATTCCGGCCCAAGGCGAAACCCGTGGCAACCTCGCGGCCGGTGGTCGTGGCGAAGCCCGCCCGTTGACCGACAAGGATCG CTGGATCGCCGCCCAGGTCGGCCCGACCTTGCGCGAAAAAGGCCTGCTGTTCGTCGGCCTGGACGTGATCGGCGAGCACCTGACCGAAATCAACGTCACC AGCCCGACCTGCATCCGCGAAATCGACAATGCCTTCGGCACCGACATCGGCGGCCTGCTGATGGATGCCATCGAGAAAAAGCTGCAAGCTTGATGTGCAT CACATGCAGCCTGTCGCTTGATGCTTGAAGCTAAAGGCGTGAAACCAACATTGCGTTATCATGCGCGGCCTGTGAAAAACGCGATGTTGGTTTTCTTGTC
DNA Sequence for Gene
>PMI24_02001
ATGACACTTCCGTCCGATCTGCCCGCTGAACTCGCCCATAAAGGCGTGCGCCCGGTCGATCGCCTCGGATTTACCCTGTTTCTCGCGGCGCTGATCCATC TGGCGCTGCTGCTCGGCGTGGGTTTCACCATGGTCGAGCCCAAGCAGATCAGCAAAACCCTGGAAATCACCCTCGCCACCTTCAAGAGCGAAAAGAAGCC GGCGAAGGCTGACTTCCTCGCCCAGGAAAACCAGGAAGGCAGCGGCACCCTCGACAAGAAGGCGATCCCCAAGACCACCGAGGTCGCGCCGTTCCAGGAC AACCAGGTCAAGAAAGTCACCCCGCCGCCCGCCGCCAAGCCGGAAGTGCAGGAAGCCGCACCCAAAGCAGCGGTGACCACCGTCGCGCCGAAACCGAAAA AGGCGCCGACCAAGAAAGAAGAAGCCAAGACCGAGACCAAACCGACGGTCGACGCCCCGACCTTCGACAGCTCGCAGCTCTCCAGCGACATCGCCAGCCT CGAAGCCGAACTGGCCAACGAACAACAGCTCTACGCCAAGCGCCCGCGCATTCACCGCCTGAGCGCGGCGTCGACCATGCGCGACAAGGGCGCCTGGTAC AAGGACGAGTGGCGCAAGAAGGTCGAGCGCATCGGCAACCTCAATTACCCCGACGAAGCCCGGCGCAAGCAGATCTACGGCAATCTGCGCCTGATGGTGT CGATCAACCGCGACGGCTCGCTGTATGAAGTGCTGGTGCTGGAGTCTTCCGGCCAGCCGCTGCTGGATCAGGCGGCGCAGCGCATCGTGCGACTGGCAGC CCCGTTTGCACCGTTTACCGGGGACCTGTCGGACATCGACCGGCTGGAAATCATCCGCACCTGGAAATTCGCCCGGGGCGACCGGCTGTCCAGTAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATACATCGCTCCCACTTTTGATCTGGGTTGTTCTCTGATCCTCAGCTTGTCAGCTTGTCAGCTTGTCAGTTTGCCCCTTCGACGCCACACTAGCGCACAT GAAAAACGTCAGCCCCAGCTACCTCAAGCATCACTTCCTGATCGCCATGCCACACATGGCCGACCCGAACTTTGCCCATACCTTGACCTACATCGTCGAG CACACGGCCAATGGCGCCATGGGGCTGGTGGTCAACCGACCGCAAGAGCTGAATCTGGCCGACATCCTCGAACAATTGCGCCCGGACATCGATCCGCCAG CGCTGTGCCAGCATGTGCCGATCTTCATCGGCGGCCCGGTGCAGACTGATCGCGGTTTTGTCCTGCACCCGGCGGGCAAGACCTTCCAGGCCACCGTCGA GCTGGACGGCGATCTGGCCCTGTCCACCTCGCAGGACGTGCTGTTCGCCATCGCCGACGGCGTGGGCCCGGCCAAAAGCGTCATCACCCTTGGTTATGCG
Amino Acid Sequence
>cell envelope biogenesis protein TonB
MTLPSDLPAELAHKGVRPVDRLGFTLFLAALIHLALLLGVGFTMVEPKQISKTLEITLATFKSEKKPAKADFLAQENQEGSGTLDKKAIPKTTEVAPFQD NQVKKVTPPPAAKPEVQEAAPKAAVTTVAPKPKKAPTKKEEAKTETKPTVDAPTFDSSQLSSDIASLEAELANEQQLYAKRPRIHRLSAASTMRDKGAWY KDEWRKKVERIGNLNYPDEARRKQIYGNLRLMVSINRDGSLYEVLVLESSGQPLLDQAAQRIVRLAAPFAPFTGDLSDIDRLEIIRTWKFARGDRLSSN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site