Strain | Pseudomonas sp. GM25 PMI24_contig_59.59, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCGTGTCCGGGGCGACGATCCTCGGCGATGGCCGGGTGGTGCTGATTCTCGACCTGCTGGCGCCGATCCGCGCGATGCAGGCGCGGTTGCCGCAGCGT CCGGCCAGTCACGAAATCGAAAGCGAACCGCAGAAGCCGTTGCTGGTGATGGTGGTCGACGATTCGGTCACGGTGCGCAAGGTCACCAGCCGCCTGCTCG AACGCCACGGCATGAACGTGCTGACCGCCAAGGACGGGGTCGATGCGATGCTGCTGCTGGAAGAACACATGCCGGACCTGATGCTGCTCGACATCGAAAT GCCGCGCATGGACGGCTTCGAAGTGGCGACCCAGGTGCGTCACGACGAACGCCTGCAACACCTGCCGATCATCATGATCACCTCGCGCACCGGCCAGAAA CACCGCGACCGCGCGATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCGTACCAGGAATCGGTGCTGCTCGAAAGCATCGCCCTGTGGAGCAAAAAAC
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DNA Sequence for Gene |
>PMI24_01994
ATGCATGAACGCCGGCACAACCAGCGCACCAGCCAACTCACCGGGCTGCTGCTGCCGCTGGCGGATCGCAACCTGATCCTGCCCAACGTCGCCGTCGCCG AGCTGATCGACTACCAGTCGAGCGCCTTCGATCTCGACACGCCGCCGTGGTATCTCGGTCGGGTGACCTGGCGTGAGCGGCAGATTCCGCTGCTGAGTTT CGAGTCGGCGTGCGGCAACAAGATCGTCATCGGCGAACGGGCGCGGATCGTCATCCTCAACGCCCTCGGCGGGCGGCCGGAGTTGAAGTTCATCGCGCTA CTGGTGCAGGGGATTCCACGCTCGTACAAGCTCGACAGCCAGTTGAGTTATGTCGACGTGCCGTTGTGTGCGCTGGAGCAGGCGGCGGTGCAGGTGGGGG AACAGGTGGCGAAGGTGCCGGATTTGTTGGCATTGGAGAAATTGTTGGTGGATGCGGGGCTTGTCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGTTACGCTCACCGTAACGGTTCGCCACTGCGCTTGATTGATGCCCCTCGATCACACTCCTAAGGTAGCTCCACGACAGCGAACCCCGTGGAGTGAGCA TGACAACAACCATTTCCCCCGACTCGCGCTGGACGCGGCGGCGTGACGAGAAGCAGCGGCGCCTCGACAAGGTGCGCGGGCTGGCCGACGGTGCGGTGTT GCCCACCGACAGGATCGTCGCGGCGCTCGAAGCGCTGATCCATCCGGGCGACCGTGTGGTGCTGGAGGGCAACAACCAGAAGCAGGCGGATTTTCTTTCC CGTGCGCTGGCCAAGGCCGATCCTGAAAAGCTCCACGATCTGCACATGATTATGCCCAGCGTCGGCCGCTCCGAGCATCTTGACCTGTTCGAACGCGGCA TCGCCCGCAAGCTCGATTTCTCCTTCGCCGGTACCCAGAGCCTGCGTATCAGCCAGTTGCTCGAAGACGGTCTGCTGGAAGTCGGCGCGATCCACACCTA
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Amino Acid Sequence |
>chemotaxis protein
MHERRHNQRTSQLTGLLLPLADRNLILPNVAVAELIDYQSSAFDLDTPPWYLGRVTWRERQIPLLSFESACGNKIVIGERARIVILNALGGRPELKFIAL LVQGIPRSYKLDSQLSYVDVPLCALEQAAVQVGEQVAKVPDLLALEKLLVDAGLVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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