Pseudomonas sp. GM25, PMI24_01961

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_58.58, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTTCCTAATGAGCGATCAGCACTATTGGTTTTTCTTATACAGCGTCAACCGGGAGAATAGCCAGCAAGCACTCTTTCTCAAGGACCACCCCCATGGCTG GCGAAACCTCATTGACCACCCTGCTGCGCAGCATGAGCCCGCAGCTCAATGCCGGCGAATACGTGTTCTGCACCTTGCGCGACGGCCAGTTGCCGAGCGG TCTGGAGGTCGTAGGCAGTTTCCGTGAACAGGAAGGCCTGACGGTAATATTGGAACGGTCCCACGCCGAGCGCGCCGGTTTCAGCTTCGACTACGTCGCG GCCTGGATCACCTTGAACGTGCATTCGGCGCTGGAAGCCGTCGGCCTGACCGCCGCGTTCGCCACCGCACTGGGCAAGGCCGGGATCAGCTGCAACGTGA TTGCCGGTTATTACCACGACCATTTGTTCGTCGGTCAGGCCGACGCCGAACGCGCCATGCAAGTGCTGCGCGATCTCGCAGCCAACGCGGAGTAACCGTC
DNA Sequence for Gene
>PMI24_01961
ATGTGGCAAAGCTATACCAACGGTTTGCTGGTGGCGTTCGGGCTGATCATGGCGATCGGCACCCAGAATGCCTTTGTCCTGGCGCAGAGTTTGCGGCGTG AACATCACCTGCCGGTCGCGGCGCTGTGTGTCGCCTGCGATGCGTTGCTGGTGGCGGCAGGAGTGTTCGGTCTGGCCACGGTGCTGGCGCAGAACCCGAC GTTGCTGGCGGTTGCCCGCTGGGGCGGCGCGGTGTTCCTGATCTGGTACGGCAGCCAGGCGTTGCGCCGGGCCTTCTCGAAACAGAGTTTGCAGCAGGGT GAAAACCAGACCGTACGTTCGCTGCGGGCGGTGATGCTCAGCGCACTGGCGGTGACGCTGCTCAACCCGCACGTCTATCTCGACACCGTTTTGCTGATTG GTTCTCTCGGTGCGCAGCAATCGGTGCCCGGCGCTTATGTGGTCGGCGCGGCGAGTGCTTCGCTGCTGTGGTTCTTCACCCTGGCGTTCGGCGCGGCATG GCTCGCACCGTGGCTGGCACGGCCGAGTACGTGGCGGATTCTCGATCTGTTGGTGGCGGTGATGATGTTCACGGTGGCGGGGCAATTGATATTGGCTTCC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATATTCCAAAAGGCTCTGGAACCTCTATCCCACACAGTTGTTGCGTGGTTAAGCCGCACCCCCGGTGCTATGATCCGAACCCTGCGCCGCAAAGAGTAA AAACTCGCCGGCGCATTTCTGGCCGCCCGTGATCGGCCTTGCGCTCACCGCAACAGACCTGATTAGGAGAATCATCATGGCTTTCGAATTGCCGCCGCTG CCTTACGCACACGATGCCCTGCAGCCGCACATTTCCAAGGAAACCCTGGAATTCCACCACGACAAGCACCACAACACCTACGTCGTGAACCTGAACAACC TGGTGCCAGGCACCGAGTTCGAAGGCAAGACCCTGGAAGAAATCGTCAAGACTTCCTCGGGCGGCATCTTCAACAACGCCGCTCAGGTCTGGAACCACAC CTTCTACTGGAACTGCCTGGCGCCAAACGCCGGCGGTCAACCAACCGGCGCACTGGCTGAAGCCATCAACGCGGCTTTCGGTTCGTTCGACAAGTTCAAG
Amino Acid Sequence
>amino acid transporter LysE
MWQSYTNGLLVAFGLIMAIGTQNAFVLAQSLRREHHLPVAALCVACDALLVAAGVFGLATVLAQNPTLLAVARWGGAVFLIWYGSQALRRAFSKQSLQQG ENQTVRSLRAVMLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVVGAASASLLWFFTLAFGAAWLAPWLARPSTWRILDLLVAVMMFTVAGQLILAS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site