Pseudomonas sp. GM25, PMI24_01580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM25 PMI24_contig_55.55, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACAAACTGGCCGCCCGTATCGGCGAGCTGGAAAAGCACAAGGCCAAGACCATCATTCTGGTCGACGCCCTGGGCCAGACCGCCGGCACCCACGCCCGC GAACTGATGAAGGCCGGCTTCACCGCCGCCAAGCTGTCCGGCGGGATTTCCAGCTGGAAAGGCGACAACCTGCCGTTGGTGAAGTGACATGAGCGACGTC ATCGTCTACTCCAGCGATTACTGCCCTTACTGCTCGCGCGCCAAGTACCTGCTCGCGAACAAAGGCGTGGCCTTCGAAGAGATCAAGGTCGATGGCAAGC CGCAGGTGCGCGCCGCCATGGCCCAAAAGGCCGGACGCACGTCCGTGCCGCAGATCTGGATCGGCGACACCCACGTCGGCGGATGTGATGATTTGTATGC CCTGGAGCGCGCCGGCAAGCTCGACGCGCTGCTCAAGGCCTGAACTGCTGCACCTGCAAACCAAGAACCCTAAAAGACCCAAGATCAGAAAGGATCTGAG
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| DNA Sequence for Gene |
>PMI24_01580
ATGACTGACCAACAGAACACTGCAGCCAGCGAAGAAGAAACCGCACCGCAATTCTCCTTGCAGCGCATCTACGTACGCGACCTGTCCTTCGAAGCCCCGA AAAGCCCGGCGATCTTCCGCCAGCAGTGGGATCCGGCGGTCGCTCTGGATCTGAACACCCGCCAGAAAGCCCTGGAAGGTGATTTCTACGAAGTCGTGCT GACCCTGTCCGTCACCGTGAAAAACGGTGAAGAAGTGGCCTTCATCGCTGAAGTGCAACAGGCCGGTATCTTCCTGATCAAGAACCTGGACGCGGGTTCG ATGAGCCACACCCTGGGTGCGTTCTGCCCGAACATCCTGTTCCCGTACGCTCGCGAAACCCTGGACAGCCTGGTGACCCGCGGTTCGTTCCCGGCCCTGA TGCTGGCCCCGGTGAACTTCGACGCCCTGTACGCGCAAGAGCTGCAGCGCATGCAGGAGTCCGGCGAGACCCCGACCGTTCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGTCGATGCAACAACGAAAAAAGCGCCGTTACAGGCGCTTTTTTCTTGGGCGATCGAGTGGCATTACTTGAAGTCGTTCTGCCGCCACGCTTCGTACA CGGCGACTGCCACAGTATTGGACAAGTTCAGGCTGCGGCAGCCTTCGCGCATCGGCAGGCGCAGGCGCTGTTCGCCGGGCAGGGCGTCGAGCACTTCCGG CGGCAGGCCACGGCTTTCCGGGCCGAAGATGAACGCATCCCCCGGGACGAACGCGGCATCGTGAAACGGCCGCGAACCCTTGGTGGTGAAGGCGAACAGC CGTGGATGACCGAGGCTTTCCAGGCAGCTGGCGAGGTCGGCATGGCGCTGCAAAGTGGCATACTCGTGGTAGTCGAGACCGGCGCGGCGCAGGCGTTTGT CGTCCATCTCGAAACCCAGCGGTTCGATCAAATGCAGGTGGCAGCCGCTGTTGGCGCACAGCCTGATAACGTTGCCGGTGTTCGGCGGAATTTCCGGTTG
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| Amino Acid Sequence |
>preprotein translocase subunit SecB
MTDQQNTAASEEETAPQFSLQRIYVRDLSFEAPKSPAIFRQQWDPAVALDLNTRQKALEGDFYEVVLTLSVTVKNGEEVAFIAEVQQAGIFLIKNLDAGS MSHTLGAFCPNILFPYARETLDSLVTRGSFPALMLAPVNFDALYAQELQRMQESGETPTVQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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