Pseudomonas sp. GM25, PMI24_01381

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_30.30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACGCATGACCGCGTTCATCTGCGATTACCTGCGCATCATGTCCTCCGGCAACATGGCTCCCCACGAGCTGGAAGGCCTGTTCGACATGGAACTGTACAG CCTGAAGGAAGACCTCGAGCATCCGTCCCATGCGGTGAACGGCATCGCCGACGCCATGCCGGGTTTCGGTATCGTTGCGGCGGTACTGGGTATCGTGGTG ACCATGGCCTCCCTGGGTGAAGGCGATCAGAAGTCCATCGGTCTGCACGTAGGTGCGGCACTCGTGGGTACCTTCTTCGGTATTCTCGCAGCGTACGGTT TCTTCGGCCCGCTGGCGCATTCCCTGGCCCACGATGCCAAGGAAGAGCTGAACGTCTACGAAGCCATCAAGGCCTCGCTGGTGGCTTCGGCTTCCGGCAT GCCGCCGTCGCTGGCTGTCGAGTTCGGTCGCAAGGTTCTGTACCCGGCTCACCGTCCAAGCTTTGCCGAGCTGGAACAAGCTGTTCGCGGTCGTTAAGTC
DNA Sequence for Gene
>PMI24_01381
ATGGAAAATAACCAGCCGATAATCATCAAGCGCGTCAAGCGCATCGCCGGCGGGCATCACGGCGGGGCGTGGAAGATCGCCTTCGCCGACTTCGCGACGG CGATGATGGCGTTCTTCCTGGTGTTGTGGCTGCTGTCCACCGCGACCCCGGAACAGAAGATCGCCATCGCCGGTTACTTCAAGGACCCGGTCGGTTTCTC CGAGAGTGGCACGCCGTACATCATCGATCTGGGCGGTACGCCGACCCTGGCGCCGGAAAACACCCTCAACCCTGAAGTGAAGTCTCAGCCGCAACCGGAC AAGGTCACGGTCGACACCGAACAGGTTGAAGGCATGGCCGAGCAGGTCGAGAAGGAACGCCTGGAACTGCTGCTGCAGGAACTGCAGAACAAGGTCGACG AGAACCCGCAACTGCAGAAATTCAAGGACCAGATCCTGTTCGAGATCACGCCGAATGGCTTGCGCATCCAGATCATGGACGCCGAGAACCGGCCGATGTT CGACTCCGGCTCTGCACGCCTGAAGCCGTACTTCGAAGACATCCTGCTGGCCATGGCCGACACCATCAAAGCGGTGCCGAACAAGATCAGCATCAGCGGT CACACCGATGCCAAGCCTTACGTGGGCAATGGCGACTTCGGCAACTGGGAGCTTTCGGCCAACCGTGCCAACGCCGCCCGGCGTGCACTGGTGGCAGGCA GTTATCCGGATGCTCAAGTGGCGCGAGTTGTTGGTTACGCCTCGTCGGCACTGTTCGACAAGGAGAACCCGTTCAACCCGGTCAACCGCCGTATCGACAT CGTGGTGCTGACCAAGAAGGCCCAGGCGGCCATCGAAGGTTCGCAAGGTGCCGACCCGTCGCAACCGGCAGATCAAGGCCAGAACGGCGCCGCGCCGGCC ACCCCGGTCGACCCGAACGCGTTGCCGGCGGATCAGCAGCCGGTGCCTGCACACGAGTTGCGCGAACGGCTGAACCTGTTCGACGACCCGCTGCCGAAAC CGACTGAACCGGGTGCAGCGGCACCAGCCCCGGCGCCGGCTGCACCGGCCACTGCTCCGACGCCCGCGCCGAAACAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCACAAAAAAGCCGCGAGATGATCGCGGCTTTTTTGTGTCTGGTGTCTCGTCCTGAATAAGGTT
Amino Acid Sequence
>flagellar motor protein MotB
MENNQPIIIKRVKRIAGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFKDPVGFSESGTPYIIDLGGTPTLAPENTLNPEVKSQPQPD KVTVDTEQVEGMAEQVEKERLELLLQELQNKVDENPQLQKFKDQILFEITPNGLRIQIMDAENRPMFDSGSARLKPYFEDILLAMADTIKAVPNKISISG HTDAKPYVGNGDFGNWELSANRANAARRALVAGSYPDAQVARVVGYASSALFDKENPFNPVNRRIDIVVLTKKAQAAIEGSQGADPSQPADQGQNGAAPA TPVDPNALPADQQPVPAHELRERLNLFDDPLPKPTEPGAAAPAPAPAAPATAPTPAPKQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site