Pseudomonas sp. GM25, PMI24_00554

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_14.14, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAGCCCGGCTTCGGTCGGGCTCAGTTGTGTTTGAAGTGACGTAAAAGGGTTGCAAAACACAAGATATAGTGAAAAACGCGGTTTTTTGCTCGTTTTTTG AGCAATCAATCACACACCAAAAAATTAATGAAAAAATTTTCTCCCGGGCCAATCCCGGCGAAAGCCCTGTAAACCCTCGCTCCGATCGAAATCATCCCCG CGCTCGACCGCCCTGCGCTGTTTCGCCCTCCCCCACGCCCGTGTTTTTTCCCTATAATGCCGCCCAATCGGGTCAGCAATATTCCCTTACAGGGATCAAA GCCATTCTGAAGCCCCGCAGCAGCGACAACGCTGACCTGCGCCCGTCAGAGGCTCTCGGAAACCCGTAAAAATTTTCTGTTTATTGCCTGCGTAGCACCG CTGCAAAAAACGACATCCAACGCGGCCTGTACGGCCGTGTGAAAAACCAACCAATCAGTTTTCACACGGGCACAGGCCCTCACGCAGGAGACGACACGTC
DNA Sequence for Gene
>PMI24_00554
ATGCTGAGCTGGGACGAATTCGACAAAGAAGACAGTGAAGTAGCAGCAGTGAAAGGCGCCAACGCCGGCCACGCTAGCGAAGCCAACATGGACCGCCTCG ACAGCGCCGGCGGTGCCGCCGCCCTCGAAGCCCGTGCCGTGACCGCCGAAGACTCGGCCGCCGTGGCCCGCGCCAAGGCTGCACTGGATTCCCTCGACGT CGCCGAAGGCCTCGCCGAACTCGAAGGCTCCGCCGCCCGTGTCGCCGTTGACGAAAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTGCCA TTCAAGTACGACTGGGCCTGGCAGAAATACCTGGACGGCTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAA ACCCGGAAGGCCTGACCGACGACGAGCGCCGCATCGTGATGCGCAACCTCGGCTTCTTCTCCACCGCCGACTCCCTGGTTGCCAACAACCTGGCCCTGGC CGTGTACCGCCTGATCACCAACCCGGAATGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAA TCGCTGGGCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGTCGGTCGCGAAAAAAGCCGCCTGGGGCCTGAAATACACCCGGGCCATCT CCGACCCGGAATTCAACACCGGCACCGTAGAGACCGACAAAGAACTGCTGCGCAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATCTTCTTCTACTG CGGCTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAAATGACCGGCGTCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAATCCATGCACCTGAAC TTCGGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCACACCTGTGGGACGCCGAAATGAAGGAAGAAGCTTCGCAGATGATTCTGCAGGGCACCC AGCTGGAAATCGAATACGCCCGCGACACCATGCCTCGCGGCGTGCTGGGCATGAACGCGGCGATGATGGAGGACTACCTGAAGTTCATCGCTAACCGTCG CCTGTCGCAGATCGGTTTGAAGGAAGAGTACCCAGGGACGACTAACCCGTTCCCTTGGATGAGCGAGATCATGGACTTGAAGAAAGAGAAAAATTTCTTT GAGACTCGGGTTATTGAGTATCAGACTGGTGGTGCTCTGAGCTGGGACTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATTTTTTCCGATATGCTCGAACAGTAGTCATTAGAAAGCCCCGCAATCGCGGGGCTTTTTTCGAATGAAAGGGAGAAAATGCAATATGGAAAGCAACACA CCCGGATACTTCGAATTAGCACTCTCTTTCGCAGACAAGAATATCTGGCCTCTGATCATATTAGTCATTGTCATAATTACAAGAAAAAGCGTGGCAAGCG CTCTTGAACGGCTGATTAAATTAAATTTCTCATTTGCCGGTGCCACAGGAGCAATGGAAGCTGCATCACCTGTAATCATAATTGAGGAACCTCGCCAACC TCATACTGATACTAAAGAAACGATAGAGCGCCCTCAAGAACAACCGCCACAAGATAAACCTAAAGAAGAAGCAGATTTTTGGGTGGCTAGGCTATTCGAC GCATTTGAGGCCAACGACCAAAAACTAGCCAAGCAAATATTCGAAGACAATCAGCACAACGAAGCTGATGAAGAAAAACAACATGACAACGAAGCTCTTT
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDSEVAAVKGANAGHASEANMDRLDSAGGAAALEARAVTAEDSAAVARAKAALDSLDVAEGLAELEGSAARVAVDEKRMINCRADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site