Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGTGGTCGGCTTCGGTCGGCTGCCCCATTCCAGCGGCCGCGAGCGCGATGTGCAGATCGTCGCCGAGGCCTTGGCGGCGGCCGACGCCAGCCATCTG GCCGGGCGCAGCTACCTGGCGCTGTCCGGCGGCGAACGCCAGCGCGTGCACCTGGCGCGGGTGCTGGCGCAGCTGTGGCCCGGCGAGCCGGGGCAGGTGC TGCTGCTCGACGAACCGACCTCGGCGCTCGACCCGCTGCACCAGCACACCACCCTGCAGGCGGTGCATGATTTCGCCCGCCGCGGTGCCTCGGTGCTGGT GATCCTCCACGATCTCAACCTGGCCGCGCGCTATTGCGACCGCCTGCTGCTGTTGCAGAATGGTCGCCCGCACCTGCTCGGTACGCCCGAGGAAGTCCTG CGCCCCGAGCCGTTGCGCGCGGTGTTCGGCCTCGAGGTCCTGGTCCAGCGTCATCCCGAGCGAGGTCATCCGCTGATCGTCGCCCGTTGAAGGAGTCGCC
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DNA Sequence for Gene |
>A0K_RS25720
ATGCGCATTCGCCTGTTCGCTTTCTGTCTGCTGCTGGGCGGCTGCCAGTCCCAACTGCCGCCGCTGCCTGATTGGCAGAGCGCGGAAGGGCGCGACGATC CGCAGACGGGACGAATCGTCGAATTGCGCAGCGGCGTGACGCTGAGCCCGCAGCAACTGGTCGCACGCCTGGCGGCCGCGCCGCGAGTGATCGTCGGCGA GAAGCACGACAATCCCGATCATCATGCCGTGGAACTGTGGCTGGCGCAGGCCCTGGGCGAATATCGGGCGCAGGGCAGCCTGCTGCTGGAAATGCTCGAT CCCGGCCAGCAACCACGGGTGGATGCGGTCCGCGCACAACTCGGGACCGGCAAGCCGGTGGCGAACCTGGAGCAGGCCCTGGACTGGCAGAAAGGTTGGG ACTGGACGCAGTACGGACCCCTGGTGTCCTGGGCGGTTGCGCAACCCGCGCCGTTGCTGGCGGCGAACCTCCAGCGGAGCGAGATCATGCGCATCTACAG GGAGCGTCCGCCGCTTCCCGGAACGGCCTCCAGGCGTGACAGCGTGCGCCTGCCGCTGCTTGCGCAGATTCGCGAATCCCACTGCGGCATGCTTCCCGAC GATCAATTGCCGGCGATGCTCGCCGTCCAGCAGCAACGCGACCGCCGCATGGCCGAGCGTCTTCGCGATGCGCCGCGGCCGGCGATGCTCGTCGCCGGCA GCTTCCACGCCCGGCGCGACCTCGGCGTACCGGTCCACCTGCGCGACCTTGGTGCGGAGAAGGGCACTCAGGTACTGATGCTGGTCGAGGCCGGGCAGGC GGTAACGACGCGTGAGGCCGACTACGCCTGGTACACGCCGGCACAGCCGGACAAGGACTATTGCGCGGAGATGAAGAAGACACGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAAGGGCGCGAGGCCTGGAGCCGCGTATCGCGCTACGTTTTCGCGGGCAAAAAAAGACCCGGCAAAGTGCCGGGTCGAAACCGTGATTAGCCTGATGA GGAGATAATCTGAAGAGTCCGACTGCTTGGTCTCTCAGCTTACCTGCTGGCCTCGCGACCAGTTGGTGTAATAATAACTATTCTCATTATCAGGTCAAGC CGGTTCTCATTCATTTCATCGCCAGCCGATGAACGGTCGTCTCCGGCCGAATCGCAGGCAAAAAAAGACCCGGCAAAGTGCCGGGTCAAAAACCGTGATT AGCCTGATGAGGAGATAATCTGAAGAGTCCGACTGCGTGGGTCTCTCAGCTTACCGGCTGATCTCGCGACCAGTTGAGTGACATAATAATGATTCTCATT TCCATGTCAAACGCTTTCGCCAAACTTTTCTGCTAGCTAGTCGCGAGCCCTCTGGAATGGGCCTCAGGCGCTGCGGCGCAGGCGCAGCTGGGTCACTTCC
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Amino Acid Sequence |
>hypothetical protein
MRIRLFAFCLLLGGCQSQLPPLPDWQSAEGRDDPQTGRIVELRSGVTLSPQQLVARLAAAPRVIVGEKHDNPDHHAVELWLAQALGEYRAQGSLLLEMLD PGQQPRVDAVRAQLGTGKPVANLEQALDWQKGWDWTQYGPLVSWAVAQPAPLLAANLQRSEIMRIYRERPPLPGTASRRDSVRLPLLAQIRESHCGMLPD DQLPAMLAVQQQRDRRMAERLRDAPRPAMLVAGSFHARRDLGVPVHLRDLGAEKGTQVLMLVEAGQAVTTREADYAWYTPAQPDKDYCAEMKKTR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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