Pseudomonas aeruginosa NCAIM B.001380, K260_RS0118130
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa NCAIM B.001380 K260DRAFT_scf7180000000061_quiver.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTAGCTTACCCCAGGGACGGAACCGTCGTTTCGATCATCGTCATCAGCCCTGTCGATAGCGACTATCGTCGCAATCGATCCCCATATCGTCCCACACC GATATATAGTTCGTCCCAACCCGATATGGACGGCCAACGGACCACCGCCATGCCACTGGACATCGACGAAATCATCAAGGCTCTCTCCCACCCGGTGCGA CGCGACATGCTGCGCTGGCTGAAGGAACCGGAGAAGTACTTCGTCGAGCAGGACCACCCGTTCGAGATCGGCGTCTGCGCCGGCAAGTTCGACCAGCGTA CCGGTCTCTCCCAGTCCACCGTGTCGGTACACCTCGCCACCCTGCAACGCGCCGGTCTGGTGACCAGCCGCCGGGTCGGCCAGTGGAATTTCTTCAAGCG CAACGAGGAGACCATCCAGGCCTTCCTCGACCAACTCGGCGACGAGCTGTAAGCAGCACTCGCTTCCACCCCACCACCTCGCAGTCCAGGAGCTCGACCG
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| DNA Sequence for Gene |
>K260_RS0118130
ATGCCGGCGTCTCTTCTCGTCCTCGCTTTATCCGCCTTTGCCATCGGTACCACCGAATTCGTCATCATGGGCCTGCTGCCGCAGGTCGCCGGCGACCTGC GGGTATCCATTCCCAGCGCCGGCTGGCTGATCAGCGGCTACGCCTTCGCCGTGGCCTTCGGCGCCCCGTTGATGGCCATGGCCACCGCCCGCCTGGAACG CAAGAAAGCCCTGCTCGCGCTGATGGGCATCTTCATCGTCGGCAACCTGCTCTGCGCGGTGGCCGCCAACTACGGCCTGCTGATGCTGGCGCGGATCGTC ACCGCGCTCTGCCATGGCGCCTTCTTCGGCATCGGCTCGGTGGTCGCCGCCAGCCTGGTGGCGCCGAACCGCCGCGCTTCCGCCGTGGCCCTGATGTTCA CCGGCCTGACCCTGGCCAACGTGCTCGGCGTGCCGCTGGGTACCGCGCTCGGCCAGGAAGCCGGCTGGCGCGCGACCTTCTGGGTGGTGACCCTGATCGG CGTGGTCGCCTTCGTCGGCCTGGCCAGGGTGCTGCCAAACGACCGCGAGGAAGAGAAGGTCGACCTGCGCCAGGAAATGTCCGCGCTGAAGAACCCGTCG CTGTGGCTGGCCCTGGGCACCACCGTGCTGTTCGCCGCCTCGATGTTCGCCCTGTTCACCTACGTCGCGCCGCTGCTCGGCGAAGTCACCGGGGTCAGCC CGCGCGGCGTGACCTGGACCCTGCTGCTGATCGGCGTCGGCCTGACCGTCGGCAACGTGATCGGCGGCCGCCTCGCCGACTGGCGCCTGGGCACCACCAT GGCCGCGGTGTTCGCCGCCATGGCGCTGGTCTCGGCGCTGTTCAGCTGGACCAGCCAGGCCCTGCTGCCGGCGGAAATCACCCTGTTCTTCTGGGCCGCC GCCGCCTTCGCCGCGGTGCCCGCACTGCAGGTCAACGTGGTCCGCGTCGGGCATGCCGCGCCGAACCTGGTGGCGACCCTGAACATCGGCGCCTTCAACG TCGGCAACGCGCTCGGCGCCTGGGTCGGCGGCAGCGTCATCGACCACGGCCTGGGCCTGACCCGCGTGCCGCTGGCCGCCGCCGCGCTGGCCGCGCTGGC GCTGCTGGCCACCCTGATCGCCTTTTCCGGAAACGGCCGCGCCCAGGCGCAGCCGGTCCTCGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCCTGTCCGTCTATTCCCTAGTGGAGGATGTTCCATGGCTACTCTGTTCGATCCCATCGTGCTCGGCGACCTCGAGCTGCCCAACCGCATCGTCATGG CGCCGCTGACCCGCTGCCGCGCCGATGAAGGCCGCGTGCCCAACGCCCTGATGGCCGAGTACTACGCCCAGCGCGCCGATGCCGGCCTGATCCTCAGCGA GGCCACCGCGGTCACGCCGATGGGCGTGGGCTACCCCGACACCCCCGGCATCTGGTCCGATGACCAGGTCCGTGGCTGGAGCAACGTGACCAAGGCGGTG CACGCCGCCGGCGGGCGCATCTTCCTGCAACTCTGGCACGTCGGGCGGATTTCCGATCCGCTCTACCTGAATGGCGAGCTGCCGGTGGCGCCGAGCGCCA TCGCCGCCGAGGGGCACGTCAGCCTGGTGCGCCCGAAGCGTCCCTACGTCACCCCGCGCGCGCTGGACACCGAGGAGATCGCCGACATCGTCGAGGCCTA
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| Amino Acid Sequence |
>putative major facilitator superfamily (MFS) transporter
MPASLLVLALSAFAIGTTEFVIMGLLPQVAGDLRVSIPSAGWLISGYAFAVAFGAPLMAMATARLERKKALLALMGIFIVGNLLCAVAANYGLLMLARIV TALCHGAFFGIGSVVAASLVAPNRRASAVALMFTGLTLANVLGVPLGTALGQEAGWRATFWVVTLIGVVAFVGLARVLPNDREEEKVDLRQEMSALKNPS LWLALGTTVLFAASMFALFTYVAPLLGEVTGVSPRGVTWTLLLIGVGLTVGNVIGGRLADWRLGTTMAAVFAAMALVSALFSWTSQALLPAEITLFFWAA AAFAAVPALQVNVVRVGHAAPNLVATLNIGAFNVGNALGAWVGGSVIDHGLGLTRVPLAAAALAALALLATLIAFSGNGRAQAQPVLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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