Strain | Pseudomonas aeruginosa NCAIM B.001380 K260DRAFT_scf7180000000061_quiver.5_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTGGAGTTCCTGGACCTGGCTCACGATGAGGTCAACCAGGAGTGGCGTGAACGTCTGACGCACGAACACCAAGCCTGACCGCACCAACCACTTCCCTT GAGGGGCGCCCTCGAGGGCGCTCCTCGTCTACCACCAGGAGCGCACCATGAACCCGCTGTTCACCAACCTCACCCAGGAAACCCTCGCTTACCTCGAGGA CCAACTGTCCAACAACGACGTCGCCGGCGACGACGAGCTCATCGACCTGTTCATCGAGGAGCTGTCGCTGACCTTGGAGCAGGCGGAAGCGGCTGTCGCG CTACGCGATCAGTACCTCTGCCAGGTCTTCCTGGTCGGCCAAGGGCCGCTGCACCGTCCTGAAGCCGATGGGCTCAGCTTCGACCCTCACACCAAGAGCG TTCGGTGACCACCACGCTCCCCTGCACCAGTTGGACTACACCCCCGAGGGGCTTCACCGCCCCTCGAGGGCGGCGTGGCTCCTCCTTCAAGGAGGTTCCT
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DNA Sequence for Gene |
>K260_RS0116890
ATGCCCAGTCCCACCCCGCTCTACCAGATCGAAGAATGCCCAGACCTGTACGTTGACGCCTGCGTGTGCGACGAGCAGCGCAACCTGGTCTTTCTTTCGG CCTGGGGCCGCGACACCGTGACACAAGAGTTCCTGGCCAGGCTGACGCTGGACCGGGAAGAAAATGGCATCGACCATTTCCACATTATCGTGGACGGCCG GCGCTTACCTGTCTTCCCAAACCAGGATCTCCTGGAGAAACGCACCACCCGCCAGTTCCGCGGCACGTTGTTCGGCAGCCTGCTCAACCTCTGGCTGTTC GATCGGCGCGCCTCGGCGCCCGACCGAGGCAATCACCTCGCCTTCGCACTCCTGCAGCGCGATGAGGATCCACACCAAAGGCTCTGGCCGCTGGTGATGG AGACCTGTCCGCTCCCCCTCCTGCAGCACTGGCGCGAGCCAGTGATGGAGGTCCTCACCCAGCACCAGATGTTGACCGCCCTGCCAGGGACGATCGGCAA CGTCTGCGCCTGGCGACTCGCCCTGCGGGTCGACGTGCTCGAGCCCACCCTCGGTGAGCTGATCCGCGAAAGCATTCTTACCACCGATGCTCAGGCACAA GCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCATCCCTCTCAGACTCAAGGAGGCCCCATGGCCCTCATGTTCCCGCGCTTGGCGCGCAACTTTGCACGCAACGGCTACTTCCCTACCGATGAGGTCAC CCTCGAACGCGCTCTGCAAGCCCTCGCTCCCGCCCCGTCGGGCAGGATGAGGATCTGTGATCCCTGCGCCGGTGAGGGGGTTGCCCTGGCTGAGGCAGCA CACATCCTCGGCCGCGACAAGGTCCAAGCCCTCGCTGTCGAGTACGACCGCGAGCGCGCCGACCATGCTCGAGGCTTGCTTGAGCGAGTGCTGCACAGTG ACCTTTTCGACACCATGATCAGCAGGCAGTCGTTCGGACTGCTCTGGCTCAACCCGCCTTATGGCGACCTGGTGGCGGACCACTCCGGTGCGTCGCAGTA CCAGGGCAGCGGCCGCAGGCGTCTGGAGAAAGCGTTCTACCAGCGCTGCCTGCCGTTGCTGCAGTACGGCGGCGTCATGGTCCTGATTGTTCCTCACTAC
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Amino Acid Sequence |
>hypothetical protein
MPSPTPLYQIEECPDLYVDACVCDEQRNLVFLSAWGRDTVTQEFLARLTLDREENGIDHFHIIVDGRRLPVFPNQDLLEKRTTRQFRGTLFGSLLNLWLF DRRASAPDRGNHLAFALLQRDEDPHQRLWPLVMETCPLPLLQHWREPVMEVLTQHQMLTALPGTIGNVCAWRLALRVDVLEPTLGELIRESILTTDAQAQ A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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