Pseudomonas aeruginosa NCAIM B.001380, K260_RS0101735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa NCAIM B.001380 K260DRAFT_scf7180000000064_quiver.13_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAACACCTCCAGCGCTGCGTAGAGCAGGACCCGAAGTATTCCGCCGGCTGGAAACTGCTGGGCAAGGCGCGCCAGGCTGCCGGCGATCTCGCGGGCGCC CGGCAGGCCTGGGAGCAGGGCCTGGCAACTGCCGCGACGCATGGCGACAAGCAGGCCGAAAAGGAAATGACGGTGTTCCTGCGCAAGCTCGACAGGGCGA GAACCTGAGCGTCCGGCCAAGGCTTGCGCAGCGCGTTCTCGCCACCCGCCGGCCGGAGTTCCGGCAGACGGGTCGGGCGTGCTCATCGAGCGCTGGCAGA ACGGTTCGAGCACGCCCCGACGACACTTTTACAAAGACCTGATCCACACATCCGTAGGCAACTTCTGTCAACGATGTAGCCTGCATCCCGAACGCCCACA ACCCCATTGAGCGACCGCTGCCGGCCCTCTAGCTTCGACTCATCGCTTCGGTCCAAGCCCGAACGCGACACCTGACTTCAACTACTTTTCCGGAGCCAAC
|
|
| DNA Sequence for Gene |
>K260_RS0101735
ATGTCGAAGCAAGAGCGTTCAGTCCCGTCCTATGTCGAATACCCATACGAGCAAGCGATTCTCTACGTTCACCGGAACGCCTCCGCCAATGAGATGCTCG AATCCGTACAGGAGCGCCTCAGGGCTCTCCTCGGCCTCCTCCATGCCTTGGAAAGGATCGAAGTGCGGACGGGGCAGGGCGTTCCCATTCAGCGCGTGGC GCACATCCTGGTCACGCTCGGCGGCGATGCCCTGACGCTGCTCACGGCCGCGCACCGGGCTACCACCTCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGAAGAAGGGCGCAACGGTCATCACGGCCTGTTGCGCCCTTCCTCCAGATTGCCTCGATGAGCCTCAAGCGTTGCTCTGCGGCCGCCCCGGCAGCATCT TCAGGATGCCGTTGAGTAGCATGCCGTAGAGCGGCACGAACAGTAGAAGACTGATACTCAGCTTCACTCCGTAGTCCACCGTGGCGATTTCCACCCAGTG CTGCGCCATGAACGGATTGTCGCTACGCCAGAACGCCACGAAGAAGAAGGTGAAGGTCTCCAGCAGGTTGCCGAGGATGGTCGAGGCGACTGGCGCGGTC CACCAGTGCCGGGAACGACGGAGGCGGTCGAATACCTGGATATCGAGGATCTGTCCGAGCACATAGGCGAGGAAGCTTGCCAGGGAGATCCGGGCGACGA AGGTGTTGAACTCGAGCAGCGCAGAGAAACCACGGAACGCCGCTTCCTGGAATAACACTGAGACTACGTAGGAGGCGATCAACGCCGGGATCATGACCCG
|
|
| Amino Acid Sequence |
>hypothetical protein
MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGQGVPIQRVAHILVTLGGDALTLLTAAHRATTS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|