Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0119370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00022.22_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTACAAGTCCGAGCACAGTCTGCAAGGCGGCACCACTCACTGGCTGCGCCCGCGCCTGCTGGGTTACGCCACAGCCCTGCTGGTGATGATCGCGGCGCTG GTGGTGGCCTTGCAGATGCGGCCGATGGTATCGCTGGACGTGATCAAGGACCGTGGCCTGTTCCGCGAAAATGCCCAGGGCCAGATCGAGAACATCTACC TGCTGAAGATCATCAACAAGACCGAGCACGCCCAGCGTTATCACCTGCGTCTGCTGGATGCCGAAGGCTTCTCCCTGCAGGGGCGCAGCGAACTGGTCAT TGCGGCCGGCGAGATGAGCGAGCTTCCGGTTTCGGTGGCCATGCGGGCCGGGCGCCCCTCCAGCAGCTCGCGAGAACTGACGTTCGAGATCCAGGACAGC GACCAGCCGGCAGTACGCAGCGTGGCGCGCAGCCGCTTCGTGGCGCCGCTCAACCGCTGATCCCTTACACTCAACCCTTGACCTTGCCTGCCGAGCCCTC
DNA Sequence for Gene
>Q378_RS0119370
ATGAAACGTTACGAACGCTTCGCCGACGACATTGCCGAACTGATCCGCTCCGGGGTACTCGGCCCCGGCCAGCGCGTGCCGTCGGTGCGTTACGCCAGCC AGACCCACGGCGTGAGCCCGTCCACGGTGTTCCAGGCCTACTACCTGCTCGAGCGCCGCGGGCTGATCCGCGCCCGGCCGCGTTCGGGTTACTTCGTCAA CGCCCACGCGCCACGCCCGTTCAATGAACCCCTGGCGTTGGAGCCGCAGGGGGAGTCGACCCATGTCGACGTCAGCGACCTGGTGTTCTCCATCCTCGAG TCGATCAAGGACCCGGGCACGGTGCCGTTCGGCTCAGCCTTCCCCAGCCCGGAACTGTTCCCGCTGCAGCGCCTGTCGCGCTCGCTGGCCAGTGCCAGCC GGGCCATGGACCCGCGCATGGTGGTCACCGACCTGTCGCCGGGCAACCCGCAGCTGCGCCGGCAGATCGCCCTGCGCTACATGGTCGGCGGGTTGATGTT GCCCATGGAGGAGCTGCTGATCACCAACGGCGCGCTGGAAGCCTTGAACCTGTGCCTGCAGGCCGTCACCGAGCCGGGCGACCTGGTGGCCATCGAGGCA CCGGCGTTCTATGCCTGCCTGCAGGTACTGGAGCGGCTCAAGCTGAAAGCCGTGGAAATCCCGGTGCAGCCGCGCGAAGGCATGGATCTGGCGGTGTTGG CCCAGACCCTGGACAAACACCCGGTCAAGGCCGTGTGGTGCATGACCAATTTCCAGAACCCGGTTGGCGCCAGCATGCCCGAGGCAAAGAAGCAGGCACT GGTCGAACTGCTGCGCCGCCACCAGGTACCGCTGATCGAAGACGACGTCTACGCCGAACTGTACTACGCGCAACAGGCGCCCAAGCCTGCCAAGGCCTTC GACACCCAGGGCCTGGTGATGCACTGCGGCTCGTTCGCCAAGAGCCTGGCACCGGGCTACCGTATCGGCTGGGTGGCTGCAGGGCGCTTCGCACAGAAGA TCGAGCGGCTCAAGCTGATGACGTCGCTGTGCGCCTCGATGCCGGCCCAGGCGGCCATCGCCGACTACCTGCAGCACGGGGGCTACGACCGCCACCTGCG CAAGCTGCGTTATGCACTGGAAGGCCAGCAGGCCAACATGCTCGCGGCAATCGCCCGGCACTTTCCGGCGCAGACGCGGGTCAGCCAACCCGCTGGCGGC TATTTCCTGTGGCTGGAACTGCCCGAACAGATGGATGCCCTGAAGCTGTTTCACATGGCGCTGGCACAGGGCATCAGCATCGCCCCGGGGCCGATCTTCT CGCCCACCCGACGCTTCGGCAACTGCATTCGCCTGAACTACGGCAGCCCCTGGAGTGACACCGCGCAAGGCGCCATGGAAACGCTCGGACGGATCATTCG TTCGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGCAGACGGCCATCGGCGCGTCTATAGTGATCACCATCGTCGACGAAACCCAGGCAGACCAGTGGACGAAGTAGCGGTGCTTTTCATCACTGGCTACGG CGAAGGCACCGCCAAGGCCTGGCAAGGCAGCCGAACCCACATCCTCTACAAACCTTTCGCGCTTGATGACCTCAAGCAACAAGTCGAACGCCTGTTGTCA CGCCAGCGGGTAGCTCCCTGAGTCGCTATGCACCCGCTGCAAGGACAGGCTAAAGTCACGCCAGTCATTTCTGTCGGAAGTCGGCATGCCATCGCCCGAT CCAAACACCCTGCATCAGCAAATCCAAGCGCTCCAGCAGCAAAATGCCCTGCTGGAGTCGCGCCTGACCCGCTACCAGGAGCAGGACCAGAACATCTACC GCTTTCTGTTCGACACCATGGACGAAGGCTTCTGCATCATCGAGTTCTTCGACGGCCCGCACGGCCCGCTGAGCGACTACGTGCATGTGCTGGCCAACGC
Amino Acid Sequence
>GntR family transcriptional regulator
MKRYERFADDIAELIRSGVLGPGQRVPSVRYASQTHGVSPSTVFQAYYLLERRGLIRARPRSGYFVNAHAPRPFNEPLALEPQGESTHVDVSDLVFSILE SIKDPGTVPFGSAFPSPELFPLQRLSRSLASASRAMDPRMVVTDLSPGNPQLRRQIALRYMVGGLMLPMEELLITNGALEALNLCLQAVTEPGDLVAIEA PAFYACLQVLERLKLKAVEIPVQPREGMDLAVLAQTLDKHPVKAVWCMTNFQNPVGASMPEAKKQALVELLRRHQVPLIEDDVYAELYYAQQAPKPAKAF DTQGLVMHCGSFAKSLAPGYRIGWVAAGRFAQKIERLKLMTSLCASMPAQAAIADYLQHGGYDRHLRKLRYALEGQQANMLAAIARHFPAQTRVSQPAGG YFLWLELPEQMDALKLFHMALAQGISIAPGPIFSPTRRFGNCIRLNYGSPWSDTAQGAMETLGRIIRSF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site