Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0115410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00015.15_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCAACAACCTGCGGCAAAACTCCCGCGCCCTGGGTCTGGGTGTAGGCCGCCTGGGCCTGTTCACCAGCATCGTGCTGTTCGACCAGCGCGTGTCGATG TGGACCAGCCTGCTGGGCCTGACCGTGGCGGTGATCGCCAGCCTCAAGTTCGGCATGGCCTTCCTGCTGGTGTACCTGCTGTGGATCGGCATCACCCGCC TGATCCTCACCATCATGCTGCTGTGCTCGGGCCACAACGTAGGCCCGGCCTACCCGCTGATTCTCTATTACAACCAGATCGTCGGCGCGCTGATGAAGAT CTACGTGTTCTTCCGTCTCGACAAGCAGTCCTGGACCCGCCAACCGACTGCCCTCAAGCGTGACCTCGCCAGCTTTCAACAATGGTTCAACACCTGGTCC TCGCGGACCATGACCTTCTCGGCTGCCAGCATCTTCGTCGCTGTGCTGTTCATGGTCGTGTGAGCCCAACCCGGATCGGATCTAACAGGAACAAACCACC
DNA Sequence for Gene
>Q378_RS0115410
ATGAATACCGCCGTGAACGTCAATGTCGTGCATGAGTCCGAAGCCCAGCGCCAACACGCCCGGGTACGCATCCCGGCCAAGCTGCGCTTTTTGGACAATG AACGCCAAGCCCACGATGTGAAGGTCGACGACCTGTCCGCCGGTGGCCTGAGCTTCCACACCAAGAAGGTGCTGTCGGTAGGCGACGTACTGCGCGGGCG CCTGCAGTTCGTGGTCGACAACCTCGGGCTGTCGATGGATATCGAGTTCCAGGTGCGCTCCTACATCAGCGACAGCGGGCGTACCGGTGCGCAGTTCCAG AACCTCGAACCGCGCGACATCGCCACCCTGCGCCATATCATCACCAGCCACCTGTCGGGCGAGCTGATCAGTATCGGCGACGTGCTCAGCACCCTGCAGC GCGACAACTTCACCAAGGCGCGCAAGCAGAAGGACGGCGGCTCCGGGCTGTCCGCCTTCGGCCGGCTCAAGGCCGTGACCGTCACCCTCGGCGTGTTTGT GGTGGGTGTCGCCGCCTTCGGTTTCGTCGCCAAGTCGTTGTATGGCATGTACTTCGTCAGCCACGCCGAAGCCGGTGTGGTCGCCGTGCCGACCACTACC GTCACCATGCCCCGCGACGGCACCGTGAGCAGCCTGGTCGAGAGCGGTGGCCAAGTGGTCAAGGGCGCGCCGCTGGCGAGCTTCAGCACCAGCATGCTGG ACATGCTCAAAGGCCATCTGGACGACTCGCAGCTGGAGCCGGCCAAGGTCGAGGAACTGTTCGGCAAGCAGCTGTCCGGCACCCTCACCAGCCCCTGCGA CTGTGTGGTCTCCCGCCAGCTGGTGGACGACGGCCAGTACGCCGCCAAGGGCCAGCCTATCTTCCAGCTGGTACCACGCACCACCACGCCGATGATCGAG GCGCGCTTCAGCTACCGCCAGTTCGACGAGGTCAAGCCGGGTACCCAGGTCAACTTCCAGATCGCCGGTGAAGACGAAGTGCGCACCGGCCAGATCGTCG GCAGCACCAGCCTCAACAGCGAAGACCTGGCATCCGACATTCGCGTGCAGATCAAGCCGGACAGCAGCCTGCCCGCAGAGCTTGCCGGGCGCCCGGCGTC GGTCAACAGCGACCGCGGCCCTTCGCTCAACTGGCTGATCGACAAAGCCGTGGCCCGTGGTCTTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGGACAAGCCGATGACCAGCAGACAACTCGATACCTGTAGGAGCTGGCTTGCCAGCGATCGAGTGCGCAGCGCTCGCCCGGCAGATGCTTCACCTGCAC TGGCCAATCGCCGGCAAGCCGGCTCCCACAAGGTCCTGTGTGCCTTGACTGCGGCAATGGTTCTCGCCGGCTGTGCCGGCCTGCCCGACCAGCGCCTGGC CAACGAAGCCCTCAAGCGCGGCGATACCGCGCTGGCCGAGCGCAACTACAAGGCCCTGGCCGATCTTGGCTACAGCGAAGCGCAAGTGGGCCTGGCCGAC ATCAAGGTGGCCACCCGCGACCCGTCGCAGCTCAAGGAGGCCGAAGCCACCTACCGCGCCGCTGCGGCCACTTCGCCGCGGGCCCAGGCGCGCCTCGGCC GCCTGCTGGTGGCCAAGCCCGACAGCACCCAGGCCGAACGTGAAGAAGCCCAAGGCCTGCTCAAGTCCGCCGCAAGCCAAGGCGAAGGCAACAGCCTGAT
Amino Acid Sequence
>Alginate biosynthesis protein alg44
MNTAVNVNVVHESEAQRQHARVRIPAKLRFLDNERQAHDVKVDDLSAGGLSFHTKKVLSVGDVLRGRLQFVVDNLGLSMDIEFQVRSYISDSGRTGAQFQ NLEPRDIATLRHIITSHLSGELISIGDVLSTLQRDNFTKARKQKDGGSGLSAFGRLKAVTVTLGVFVVGVAAFGFVAKSLYGMYFVSHAEAGVVAVPTTT VTMPRDGTVSSLVESGGQVVKGAPLASFSTSMLDMLKGHLDDSQLEPAKVEELFGKQLSGTLTSPCDCVVSRQLVDDGQYAAKGQPIFQLVPRTTTPMIE ARFSYRQFDEVKPGTQVNFQIAGEDEVRTGQIVGSTSLNSEDLASDIRVQIKPDSSLPAELAGRPASVNSDRGPSLNWLIDKAVARGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site