Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0114960

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00014.14_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGACCACCCGGTTGCTGTTCGAATTCAAGCGCGGCAGCAAGATTCGCGAATTCAAGCCCTCGGAAGTGCTCAGCCACATCAACCGCGGGCTGATCAACT GCAAGTTGGGCAAGCACGTGACCATGGTGGGCGGGGTGATCGACGAGGCGACCGGTCTGCTGACCTACGCCGTGGGTGGCCACCTGCCGCTGCCGGTGCT GTACACCCCGGGACATGCGCGTTACCTGGAAGGCCGCGGTCTGCCGGTGGGGTTGTTCGAAGAGGCGACCTACCAGGACCTGGTGATCGAGTTGCCGCCG CAGTTCAGCCTGAGCTTGATGTCCGATGGCATTCTGGACCTTTTGCCGGGGGACACGCTCAAAGATAAAGAAGCCGCCTTGCCGGACATCGTCAAGGCCT CGGGTGGCAGCCTGGATGGGCTGCGCCAACGATTCGGATTGGCTACGCTTGGGGAGATGCCGGATGATATCGCCCTATTGGTGTTGAGCAGGAACCTTCA
DNA Sequence for Gene
>Q378_RS0114960
ATGAGTACCGGTAGAATCCAGTTCGCCGAGCAGAGCGGTACCTTCGTACTGAAATTCGTCGGTGAAGTGCGGCTGACCCTGTGTTCGGCGCTGGATGCAA CGATCGAGAAGATCTTCACCGCGCTGAACTTCTCGGCCATTGTCATCGACCTGACTGAAACCGAGAGCATCGACAGCACCACCCTGGGCCTGCTGGCCAA GCTGTCGATCCTGTCGCGGCAGAAAGTGGGCCTGCTGCCCACCGTGGTCACGACCAACCCGGACATTTCCCGCCTGTTGCAGTCGATGGGCTTCGATCAG GTGTTCAACATCGTCGATCGCCCGGTGCCGTGCCCGGAATGCCTGACTGACCTGCCGTCCCAGGATCAGAACGAGGACGTGGTGCGCTCCAAGGTACTGG AGGCGCACAAGATTCTCATGGGCCTGAATGATTCCAATCGTGAAGCTTTCCACGACCTGGTGAACGCCCTCGAGCGGACCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGTACCGGCCTCATCGCCTGCTCCCGCAGCCTGAGCGCAGTGGGGTTCTCTGTGGGAGCCGGCTTGCCGGCGATGAGGCCGGCAAACCTCCTGCAAA ACCCAGTTCAGTCTTTCGCCGCCACAAACTCGGCAGCCTCGCTGCCATCCGCACTCAACTGAAGCACCCGCGCCGGCCGCCCCTGCTCATCGAAGAACAC TTGCCCCAACCCCGCCCCGTTCCACAGCCTTTCCCCGGCCCTGCTACGGTTGGGCGTGCGCGGTACCACTTCCATCTGCCGCCGCTTGGTAAACCAGTTG AGCGGCGAGCGCGGCGAGTAGAACCAGCGGTTGAGCCGGTCCAGTACATCCAGCAAGCGCCGCGGGAACTCGTTCTTGATACCGCTGCTGGTCACCTGCC ACAGGTGCGGGCTGCGCTGGCGGTGACGGATCAGCACTTCATAGACGAACGAGTAGTGCACATCACCCGAAAGAATCACGTAATGCCCCGGCGTGCGCGA
Amino Acid Sequence
>anti-sigma-factor antagonist
MSTGRIQFAEQSGTFVLKFVGEVRLTLCSALDATIEKIFTALNFSAIVIDLTETESIDSTTLGLLAKLSILSRQKVGLLPTVVTTNPDISRLLQSMGFDQ VFNIVDRPVPCPECLTDLPSQDQNEDVVRSKVLEAHKILMGLNDSNREAFHDLVNALERT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site