Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0113845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCCCTCGACCCGCAAACCACGGCCTCGGTGCTGCAACTGCTGGCCGAGATCAACCGTGAGCTGAAACTGACCATCGTGCTGATCACCCACGAAATGG ACGTGATCCGCCGGGTCTGCGACTGCGTGGCGGTGATGGATGCCGGTCAGATCGTCGAGCAGGGCTCGGTGGCCGAGGTGTTCCTGCACCCGCAGCACCC GACCACCAAGCGCTTCGTCCAGGAAGACGAGCAGGTCGACGAGAGCGAACAGCGCGACGACTTCGCCCATGTGCCAGGCCGCATCATTCGCCTGACCTTC CAGGGCGAAGCCACCTACGCACCACTGCTGGGCACCGTCGCCCGCGAAACCGGGGTGGACTACAGCATCCTCGCCGGGCGTATCGACCGTATCAAGGATG TGCCCTATGGGCAGCTGACCCTGGCCGTCACCGGCGGCGACATGGAAGCGGCGTTCGACCGCTTCAAGGCAGCTGACGTACATATGGAGGTACTGCGTTG
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| DNA Sequence for Gene |
>Q378_RS0113845
ATGGACGCCCTGAATTTCTTCGCCAACGTCGACTGGGCCGAAATCTGGCTGGCCACCGTCGATACCATGATCATGCTGTTCGGCTCGCTGTTCTTCACCG TGCTGCTGGGCCTGCCGCTGGGTGTGCTGCTGTTCCTCTGCGGCCCGCGGCAGATGTTCGAGCAGAAGGGCGTTTACGCGCTGCTGTCGCTGATCGTCAA CATCCTGCGTTCGCTGCCGTTCATCATCCTGCTGATCGTGATGATCCCGATCACCGTGCTGATCACCGGCACCTCGCTGGGCGTGGCGGGTGCCATCCCG CCGCTGGTGGTGGGGGCCACGCCGTTCTTCGCGCGCCTGGTGGAAACCGCCCTGCGTGAAGTGGACCGCGGCATCATCGAGGCCACCCAGTCGATGGGCG CCACCACTCGCCAGATCATCACCAACGCACTGCTGCCAGAAGCCCGTCCGGGCATCTTCGCCGCCATCACCGTCACCGCCATCACCCTGGTGTCGTACAC CGCGATGGCCGGTGTGGTCGGCGCCGGCGGCCTGGGCGACCTGGCCATCCGCTTCGGCTACCAGCGCTTCCAGACCGACGTGATGATCGTCACCGTCGTG CTGTTGCTGATCCTGGTTCAAGTCCTGCAGAGCGTGGGCGACAAACTGGTAGTGCATTTTTCCCGTAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCAATGGGGTCGGCCCTGCCGACCCGTTCGGGGGCCGTCGCGGCCCTCACAAGGAGTGATTCATGAAGAAGCTGCTTGCTGTCGCTGCCGCTGTCGCG GCCTTCTCGGCCCATGCCGGTGACCTATCGGTCGCCGCCACCCCGGTGCCGCACGCCGAGATCCTCAACTTCGTCAAACCGCAGTTGGCGAAAGACGGTG TGAACCTCAAGGTGAAAGAATTCACCGACTACATCCAGCCGAACGTGCAAGTGGCCGAAAAGCGCCTGGACGCCAACTTCTTCCAGCACCAGCCGTACCT GGATGAGTTCAACAAGGCCAAGGGCACCAATCTGGTCAGCGTGGCCGGCGTGCACATCGAACCGCTGGGCGTCTACTCGGCCAAGATCAAGAAGCTCGAC GAGCTGTCCTCCGGCGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGCCGTGCCCTGCTGCTGCTGGACAAGGCAGGCGTGATCAAGCTCAAGG
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| Amino Acid Sequence |
>D-methionine ABC transporter MetI, membrane protein
MDALNFFANVDWAEIWLATVDTMIMLFGSLFFTVLLGLPLGVLLFLCGPRQMFEQKGVYALLSLIVNILRSLPFIILLIVMIPITVLITGTSLGVAGAIP PLVVGATPFFARLVETALREVDRGIIEATQSMGATTRQIITNALLPEARPGIFAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMIVTVV LLLILVQVLQSVGDKLVVHFSRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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