Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0113520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGTCAATTTCCAACCAGCCTTTCCTTATGGAAGGCGTCTCTGGCTTCTCGTCCAGTCGACACTCGATCGGCTGGACAAACGGACGACAGAATGAAAAAA AAGAAGAGAGATATAAAAAGCTTTTCTGAAGAACTTATAACTCTTAAGTGGATAAGTGTCTGTGGATAACATTCTGCAGGCCAATACTCACGGGCTGTAC AGAATTTTGAAACCTTGTCCACAACAGGTGCTGCGTCTGTGTGGCCTGTGGGTAAAACCTGTGGAACAAATCGATGCTTATCCACAGGTGAGTTATCAAC AGATCTGAACTCAGGGTTGTGCATAGCCCTCATGTGCGCTTATCCACAGGGCTTATTCGTAGTCATGTCGAGCTGTTTTGGTCGCTAAATGGCTGATTTG GCATGGCTCAGAATGTTTCCACATGTGGATAACTGAGCGCTCGACCGGTACAATGGCGGTTTGTTTTTGCCTCATCCGGCTTTCAACTCAGGGGATATCC
DNA Sequence for Gene
>Q378_RS0113520
GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTCTGCGCGATGAACTGCCTGCCCAGCAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCG AAGGCGACGAGTTGCGCGTCTATGCGCCTAACCGTTTCGTTCTCGATTGGGTGAATGAAAAGTACCTCGGCCGCCTTCTCGAACTATTGGGTGAAAACGG CAGCGGCATCGCGCCAGCCCTTTCCTTGTTGATAGGCAGCCGTCGCAGCTCCGCACCGCGGGCCGCCCCCAACGCCCCGGTCAGTGCTGCAGTGGCGGCG TCTCTCGCACAAAGCCATGCGCAACCCGCTGCTGCGCCAGCCGCAGCGCTCGTCGAGCCAGCCACGGCTGCCGTTGTCGAGGCCGTCTCGATCGAAGACA GCCCCGAGCCGTCTTCGCGTGAAAGCTTCGATGCCATGGCAGACAGCAACCCGGTGCCGACCGCGAGCGGACGTACCGAACAGCGCACCGTCCAGGTCGA AGGCGCGCTCAAGCACACCAGCTACCTGAACCGCACCTTTACCTTCGAGACGTTCGTCGAAGGCAAGTCGAACCAGTTGGCTCGCGCCGCTGCCTGGCAG GTGGCCGATAATCCCAAGCATGGCTACAACCCGCTCTTCCTTTATGGCGGGGTGGGCCTGGGCAAGACTCACTTGATGCATGCTGTGGGTAACCATCTGT TGAAGAAGAATCCGAATGCCAAGGTGGTCTACCTGCATTCCGAGCGCTTCGTGGCGGATATGGTCAAGGCGCTGCAGCTCAACGCGATCAACGAGTTCAA GCGCTTCTATCGCTCGGTCGACGCCTTGCTGATCGACGACATCCAGTTCTTTGCCCGCAAGGAGCGTTCGCAGGAGGAGTTTTTCCACACCTTCAACGCC TTGCTCGAAGGTGGCCAGCAGGTGATTCTCACCAGCGACCGCTACCCCAAGGAAATCGAAGGCCTGGAAGAGCGTCTGAAGTCGCGCTTCGGCTGGGGCC TGACTGTGGCTGTAGAGCCACCGGAACTGGAAACCCGTGTCGCGATCCTGATGAAGAAGGCCGACCAGGCCAAGGTCGAACTGCCACACGACGCGGCGTT CTTCATCGCCCAGCGTATTCGCTCCAACGTGCGTGAACTCGAAGGCGCGCTCAAGCGTGTGATCGCTCACTCGCACTTCATGGGCCGCGATATCACCATC GAGCTGATTCGTGAATCGCTGAAGGACCTGTTGGCGCTGCAGGACAAGCTGGTCAGTGTGGATAACATTCAGCGCACCGTGGCCGAGTACTACAAGATCA AGATCGCCGATCTGTTGTCCAAGCGTCGCTCGCGTTCCGTCGCGCGCCCACGCCAGGTGGCCATGGCGTTGTCCAAGGAGCTCACCAACCACAGTCTTCC GGAGATCGGCGACATGTTTGGTGGCCGTGACCACACCACCGTGCTGCACGCCTGCCGCAAGATCAACGAATTGAAGGAATCCGACGCGGACATCCGCGAG GACTACAAGAACCTGCTGCGCACGCTGACGACCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCCGTCAGCCCAGCTAATTGAAGGCAAGGGACTAGACCATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCCGGTGTC GTCGAGCGCCGCCAGACCTTGCCGGTCCTGTCCAACGTACTGCTGGTCGTACAAGGCCAGCAGCTGTCGTTGACCGGTACCGATCTGGAAGTCGAACTGG TAGGCCGCGTGCAACTGGAAGAGCCGGCCGAGCCTGGCGAGATCACTGTCCCGGCGCGCAAGCTGATGGACATCTGCAAGAGCCTGCCGAACGACGTTCT GATCGACATCAAGGTCGATGAGCAGAAGCTGTTGGTCAAGGCCGGTCGCAGCCGTTTCACCCTGTCGACCCTGCCGGCGAACGACTTCCCGACCGTGGAA GAAGGCCCAGGCTCGCTCACCTGCAACCTGGAGCAGAGCAAGCTGCGTCGCCTGATCGAGCGCACCGGCTTCGCCATGGCCCAGCAGGATGTTCGTTACT
Amino Acid Sequence
>chromosomal replication initiator protein DnaA
MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLLELLGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAA SLAQSHAQPAAAPAAALVEPATAAVVEAVSIEDSPEPSSRESFDAMADSNPVPTASGRTEQRTVQVEGALKHTSYLNRTFTFETFVEGKSNQLARAAAWQ VADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNA LLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITI ELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKIADLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRKINELKESDADIRE DYKNLLRTLTT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site