Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0109190
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF06812 | ImpA, N-terminal, type VI secretion system | IPR010657 | ImpA, N-terminal | 20 | 133 | 3.8E-29 |
| NCBIfam | TIGR03363 | JCVI: type VI secretion system protein TssA | IPR017740 | Type VI secretion system protein TssA-like | 9 | 359 | 2.2E-110 |
| PANTHER | PTHR37951 | CYTOPLASMIC PROTEIN-RELATED | IPR017740 | Type VI secretion system protein TssA-like | 1 | 348 | 4.1E-43 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.