Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0106765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCCGGGCATCAACACCGAGCCGTTCTGGGGCAAGGATGGCAACACCCTGTACTTCACCTCCGACCGTGGCGGCAAGCCGCAGATCTACAAACAGTCGG TCAGCGGTGGCGGTGCGGAGCGCGTGACATTCGTGGGCAACTACAACGCCAACCCGAAACTGTCGGCGGACGAAAAGACCCTGGTCATGATCCATCGCCA GCAGGGCTTCACCAACTTCAAGGTGGCGGCACAAGACTTGCAGCGCGGAAGTGTAAAGATTCTCTCCGAGACCAGTCTTGACGAGTCTCCCACTGTCGCG CCTAACGGCACCATGCTAATCTACGCCACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTGTCGCTTAACGGCCGCGTGAGGCTCCCACTTCCTACCG CTCAAGGCGAAGTCAGAGAACCGTCCTGGTCCCCTTACCTGAACTGATTGCGGCGTAATACTTTTGCTTAACACACTGGGGTTTCATTAGGAGTTTCACG
DNA Sequence for Gene
>Q378_RS0106765
ATGGAAATGCTGAAGTTTGGTAAATTTGCTGCGCTGGCTCTGGCCATGGCCGTAGCTGTAGGTTGCTCCTCGAAGGGCGGTGACAACGCTGGTGAAGGCG CTGTCGATCCGAACGCTGGTTACGGCGCCAACACCGGTGCTGTCGACGGCTCCCTGAGCGAAGAAGCTGCCCTGCGCGCAATCACCACCTTCTACTTCGA ATACGACAGCTCGGACCTGAAGCCAGAAGCCATGCGCGCTCTGGACGTTCACGCCAAGGACCTGAAGTCCAACGGCAACCGCGTTGTTCTGGAAGGCAAC ACCGACGAGCGCGGCACCCGCGAGTACAACATGGCTCTGGGTGAGCGTCGTGCGAAAGCCGTTCAGCGCTACCTGGTTCTGCAGGGTGTTTCCCCTGCTC AGCTGGAACTGGTTTCCTACGGCGAAGAGCGTCCAGTTGCCACCGGCAACGACGAGCAGTCCTGGGCTCAGAACCGTCGCGTAGAACTGCGTAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCCTATGCGTATGTGCCGCCGTGCTGTAACCGTACTCGCACTCAGCCTTCCGCTTTCGGCGTGGGCTGCTGTTCCTGTAGTAGATGACAACGCAGGTG CTTACCCACCTTCGGGTTATGGCACGAGCGGCGCCTATGCCGGGGCTGGGGCTTCGACCCCAGCTTCGGCACAGGGCCAGCTGTTCATGCAGCTGCAACA GATGCAGGATCAGATCTCCCGCCAGCAAGGCATCATCGAAGAGCTGCAGAACGATGTCGCCCGCATGAAGCAGGAAAACCTGGAGCGTTACCAGGATCTG GACCGTCGCATCAACAGTGGTGGCGCGCCAGCCGCGACCCCCGACAATTCCTCCACCGGTGCGGCCCCAGATGCCGCCGCCGGTGCAGCAGCCGGCGCCG CAGGCGCTGCTGCACAACAACCGGCCGCCAGCAGCGAGCCGGGTGATCCGGCGAAAGAAAAGCTCTACTACGATGCTGCTTTCGACCTGATCAAGCAGAA
Amino Acid Sequence
>peptidoglycan-binding protein
MEMLKFGKFAALALAMAVAVGCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKSNGNRVVLEGN TDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site