Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0106120
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 140 | 391 | 4.7E-62 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 137 | 382 | 2.6E-47 |
| CDD | cd17546 | REC_hyHK_CKI1_RcsC-like | - | - | 5 | 120 | 1.75888E-21 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 145 | 380 | 1.29947E-64 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 143 | 391 | 2.75E-59 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 3 | 120 | 1.7E-17 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 3 | 124 | 3.98E-24 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 143 | 376 | 1.9E-48 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 143 | 386 | 1.0E-51 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 5 | 118 | 2.9E-17 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 2 | 126 | 3.0E-25 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.