Strain | Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCCCTTCGCCGAGCGGGTGTTCACCCACTTCGACGACGAAGACGCCGCCCAGCGCCTGGACCTGCCTGCCGTACTCGGCGCCAGCGCGACCGGCACCC ACATGTACACCTGCGGCCCGTCGGGCTTCATGGACTGGGTGATCGCCGGCGCGCGCCAGCAGGGCTACGCCGAGGACCACATCCACAAGGAGTACTTCCA GGTCGAGGTGGATGCCAGTGGCGCCAGCTTCGAAGTGGTCGCGGCGCGCAGCAACAAGACCGTGCAGGTTGCCGAGGGCCAGAGCATCCTCGATGCGTTG GCCCAGGTCGGCATCAAGATCGATATCTCGTGCGAGCAGGGTGTGTGCGGTACCTGCATGTGCGAGGTGCTCGAAGGCGAGCCGGACCATCGCGACGTGT ACCTGACCGATGAAGAGAAAGCCGCGAACGACCAGATCCTGGTGTGCTGCTCGCGGGCCAAGTCCAACAAGCTGGTGCTGGATATCTGAGGAGCATGACC
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DNA Sequence for Gene |
>Q378_RS0101305
ATGGTTGACGTAACCCAATTTCGCAACGCAATGGCCATGCTCGGTGGCGCCGTGTCGGTCATCACCACCGATGGCCCTGCCGGTCGCTTTGGCTTTACCG CCTCGGCGGTGTGCAGCGTCACCGATTCGCCGCCGACCTTGCTGGTGTGCATGAATCGTTCGTCGTATTCCAACGAGCAGTTCAAGGCCAATGGTGCGTT GTGCGTGAACGTGCTGGCCGGGACCCATCAGGAGCTGTCAGGGGCTTTCGCCAATCGCCAGCTGAGCATGGAAGAGCGCTTCGCCAGCACCCACTGGAGC GTGCTGGAAAGTGGCGCGCCGGTGATGCAGGAAGCGCTGGTGAACTTCGACTGCCGGATTGCCCAGGTGCATGAGGTGGGCTCGCACAGCATCTTCTACT GCGAAATCCAGGAAATCCGCCAGGGTGGCGCCGATGACGGGCTGGTGTATTTCAACCGTGCCTATCACCGGGTGTGCGACGCCTCGAAGGCCTGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTCTAGCGACCGCGCCGCCGCGAAACCCGCGCCTCGATGTTCTTGCGGCCGATCAGCAGCGGCGGTTTCTCCACCACCGGCTCATCGGCCAGCCACTTG TACATCACCAGGCAGTCCACCAGGCCCAGGCGGGCGTGGCGGAATGCCTTGGGCAGGCGGCCGACCGTGTCGAAGCCGAGCGTGTGCCACAGCGCCACCG CCACTTCGTTGCTGGCCACCACCGAGTTGAACTGCAGCGCCAGGAAGCCTTCCTGGCGCGCCAGTTTCTGCGAGTGTTCGCACATCTGCCGTGCCACGCC GCGGCCACGGGCGGCCTCGCTGACCATGTAGCCACAGTTGCCGACATGGCCACCGGGGCCGGCGGCATTGGCCTTGAGGTAGTAGGCGCCGAGCAACTCA CCGTCCTGTTCGGCCACCAGCGTGCGCAAGGGCAGCTCCAGCCATAGCTGGCGGGCCTGCTCGAAGCTCAGGGCCGGGTCGTAGGCGTAGGTTTCGCGGG
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Amino Acid Sequence |
>flavin reductase domain-containing protein
MVDVTQFRNAMAMLGGAVSVITTDGPAGRFGFTASAVCSVTDSPPTLLVCMNRSSYSNEQFKANGALCVNVLAGTHQELSGAFANRQLSMEERFASTHWS VLESGAPVMQEALVNFDCRIAQVHEVGSHSIFYCEIQEIRQGGADDGLVYFNRAYHRVCDASKAC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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