Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0100145 (ampC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00001.1_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATTGCCACGCGCCAACGAGGTGAAGGCAATGGCCGATTGCACCGTAGCCGGCAAGGCGCACAGGTACAGCACGCCCAGGTACAGTTCATTGCCCACCAGC GGTACGAACAACGGCTTGAACGCCATCCCCAGCAGCGGGAACAGCACGAAAGTGCAGGAGAACACCAGCAGGTGCAGGCGCCAGTGCCCGGCACCGGCGA TGATCGCCTCGCGCGACAGCTTGGCGCCATGCAGGAAGAACAGCAGACCGATGGCCAGGTTGGTCAGCCAGCCAAAATAGACCGCGCCGTCGCCCGAGCA GGGCAGCACGGTAGCGATCAACACCACCCCGAGCAGTGCCAGGGTGAAGTTGTCGAACAACATGCGCAAATACTTCATATCCGTTTCCGTCTTGTCGTTG TGCAAGGTCAGACGATAAGGTTTGAAGCTTTTCCCCGCTAACGCCGGAAGCCCCACCGGTGTCGCTCAACGGACACCCCTCCGAAAAAGGACCTTTTTGC
DNA Sequence for Gene
>Q378_RS0100145 |ampC
ATGGCTCTCGCCCGTCTTCTACCGCTTCTCGCCGCCACCGCCCTAGCCTTGGGCAGCACTGCCGCGCAGGCTGGCAGGTCACTGAAGACCCAGGTGGACG AAGTGATCGAACCGGTGATGCGGGAGCACGCTATTGCCGGCATGGCGGTAGCGGTGTTCGCCAACGGCCAGGCGCATTACTTCAGCTATGGCGTGGCGAG CAAGGCGACAAGTGCACCGGTTACTGCCGATACGCTGTTCGAGATCGGCTCGCTGAGCAAGACCTACACCGCCACCCTGGCCGCCCTCGCCAGCGCCGAG GACAAGCTCGACCTGCAGGCACCGGCCCGACGCTATCAACCGGCTCTGGCCGGCACCCCGCTGGGTGACGCCAACGTGCTGGAACTCGGTGCCTACAGCG CCGATTGCCTGCCGCTGCAGTTCCCCGACGAGGTGCAGACCGACAGCCAGGCGCTGGACTTCCTGCGCAACTGGAAGCCACGCACCGTACACGGCACCCG GCGCTGCTATTCGAACCCAAGCCTGGGCCTGTTCGGCGACCTCGCCGCACGCGCACAGCAACAACCGTTCAGCGAACTCATGAGCCAAGGCCTGTTGCCG CAGATGGGCTTGCAACACACCTACCTGCAGGTGCCGGCGCACGCACAGAAGTCGTATGCCCAGGGTTACGACGCGAAAGACCGGCCCGTGCGCGTCAACC CCGGCCCCTATGCCGATGCGGCCTACGGCATCAAGACCAACGCCCGCGACCTGCTGCGCTTTGTGCGCCTGAACATGCAACCGGCCGAATTGAAGCCCGC GTTGCGCGAAGCTGCCGCCATCACCCAGGCTGGCTACTTCCAGGTAGGCGCCATGGTTCAAGGGCTCGGCTGGGAGCGCTACGCCTACCCGGTGTCGCTC GACACCCTGGTCGATGGCAACAGTGCCAGTTTTGCCCTCGAACCCCAACCCACCCGCCGCCTCGACCCGGCCCTGCCCGCTTCGCCCCAGGCCTGGTACA ACAAGACCGGATCGACCAGTGGTTTTGGCGCGTATGCCGCGTTCATTCCAGGCGAAGGCAAGGCCATCATATTGCTCGCCAACCGCAATTACCCGAACGA AGCACGGGTGCGCGCCGCCTACCGGATTCTCTCCAGCATCGACCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGACCTTCGCGAGCGGATTGTCGGACAAGATGTAGTGCATAAAAATATTCACTACAAAACGGTTGACGCCGTTCATCGCCCTTGGGCATGATGAAGCCG TCTCCCTGATCGGGAGCGGTGGCAAGGGTGTTCCAGACGGCCTGCGCGGTAACGCAGGCCGTCCGTGGAGAGGGAACTGTCCAAAAGGCAGCGTGAGAAA GCCCCTGTTGCGATGCTGCTGTAGCAGCCTTGGTAGTGCGCTACACGTCGTGGCGCCAACTGTGAAAAACACCAAACAATGGGTAATGGGGGCTTTATGA TGAACTTGAACAACAAACCGACGATCGACCAACTGGCCCAGCTGTTCGCGATGCGCAAGGACAGCCTTGACGACCATTTGCTGTGGGTCAGCCAAACCGG CGAAGTGCGTCTCGACCGCCTGCCGCCGAACACCGTGGAAGATGAATTCGAAGCGCACCTGCCCAGCATGCGCGCCCGCTTCAAGGTCTACCGTCGTGGC
Amino Acid Sequence
>beta-lactamase/D-alanine carboxypeptidase
MALARLLPLLAATALALGSTAAQAGRSLKTQVDEVIEPVMREHAIAGMAVAVFANGQAHYFSYGVASKATSAPVTADTLFEIGSLSKTYTATLAALASAE DKLDLQAPARRYQPALAGTPLGDANVLELGAYSADCLPLQFPDEVQTDSQALDFLRNWKPRTVHGTRRCYSNPSLGLFGDLAARAQQQPFSELMSQGLLP QMGLQHTYLQVPAHAQKSYAQGYDAKDRPVRVNPGPYADAAYGIKTNARDLLRFVRLNMQPAELKPALREAAAITQAGYFQVGAMVQGLGWERYAYPVSL DTLVDGNSASFALEPQPTRRLDPALPASPQAWYNKTGSTSGFGAYAAFIPGEGKAIILLANRNYPNEARVRAAYRILSSIDL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site